RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DCAF16Q9NXF7 216 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 FZR1Q9UM11 496 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 TBL2Q9Y4P3 447 aaKnown RBP9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 MGST3O14880 152 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 ACTL6BO94805 426 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 CA2P00918 260 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 IGKV3-15P01624 115 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 OR5G3P0C626 314 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 CRYBB3P26998 211 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 AMTP48728 403 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 RELQ04864 619 aaPredicted RBP9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 KCNS1Q96KK3 526 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 DUSP13Q9UII6 198 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 FOXA2Q9Y261 457 aaPredicted RBP9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 F2RL2O00254 374 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 IGHV3-13P01766 116 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 IGHV3-7P01780 117 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 ZNF134P52741 427 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 LOXL3P58215 753 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 SUMO1P63165 101 aaKnown RBP9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 RNFT1Q5M7Z0 435 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 C1orf174Q8IYL3 243 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 DDB2Q92466 427 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 NEUROG1Q92886 237 aa9.73□□□□□ -0.85
VIPAS39-211ENST00000557658 SPINK4O60575 86 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 ZNF253O75346 499 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 LINC00869P0C866 280 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 CR1LQ2VPA4 569 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 OR4A47Q6IF82 309 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 DOLPP1Q86YN1 238 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 Q8N976 141 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 FER1L6-AS2Q96M78 137 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 TMEM14BQ9NUH8 114 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 TECRQ9NZ01 308 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 URB1O60287 2271 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 MMP23AO75900 390 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 AMY1AP04745 511 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 SFTPCP11686 197 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 RAB7AP51149 207 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 SPATA45Q537H7 98 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 NABP2Q9BQ15 211 aa9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 RNASE7Q9H1E1 156 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-211ENST00000557658 IGKV1D-17A0A075B6S4 117 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 A0A1W2PS18 150 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 ISLRO14498 428 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 HLA-DQA1P01909 254 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 PMCHP20382 165 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 KIAA1644Q3SXP7 199 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 HINT2Q9BX68 163 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 PLEKHA3Q9HB20 300 aa9.71□□□□□ -0.85
VIPAS39-211ENST00000557658 SRRM5B3KS81 715 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 COL8A2P25067 703 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 CTRLP40313 264 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 FXYD3Q14802 87 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 CNEP1R1Q8N9A8 125 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 STARD4Q96DR4 205 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 CLCF1Q9UBD9 225 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 UQCR10Q9UDW1 63 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 VPS13AQ96RL7 3174 aa9.71□□□□□ -0.86
VIPAS39-211ENST00000557658 A0A1W2PNU3 283 aaPredicted RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 ITGB1BP1O14713 200 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 OR7C2O60412 319 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF324O75467 553 aaPredicted RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 REG1AP05451 166 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 CECR9P0C854 216 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 SRIP30626 198 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 TCL1AP56279 114 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 TAS2R45P59539 299 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 RTL8BQ17RB0 113 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 IBA57Q5T440 356 aaKnown RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 TMEM178AQ8NBL3 297 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 OR2Z1Q8NG97 314 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 SLC35E1Q96K37 410 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 TRIB1Q96RU8 372 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 CALYQ9NYX4 217 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 CBY1Q9Y3M2 126 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 OR51B2Q9Y5P1 312 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 ZNF83P51522 516 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 SLC35B1P78383 322 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 C1orf162Q8NEQ5 155 aaPredicted RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 RCHY1Q96PM5 261 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 GCM1Q9NP62 436 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 RAB9BQ9NP90 201 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 ZFP30Q9Y2G7 519 aa9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 YLPM1P49750 1951 aaKnown RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 HEATR1Q9H583 2144 aaKnown RBP9.7□□□□□ -0.86
VIPAS39-211ENST00000557658 TMEM265A0A087WTH1 108 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 BMPR1BO00238 502 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 PRRX1P54821 245 aa9.69□□□□□ -0.86
VIPAS39-211ENST00000557658 MRPS11P82912 194 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms