RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.8
SHMT2-233ENST00000557529 B4DSR2 109 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 NBR2O15453 112 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 CA2P00918 260 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 IGKV1D-33P01593 117 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 IGKV1-33P01594 117 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 GATA3P23771 443 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 BRS3P32247 399 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 SERF2P84101 59 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 RUNX1Q01196 453 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 AANATQ16613 207 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 DEFB113Q30KQ7 82 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 IL34Q6ZMJ4 242 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 PPP1R27Q86WC6 154 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 NPBQ8NG41 125 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 MARC2Q969Z3 335 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 C1orf159Q96HA4 380 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 REG4Q9BYZ8 158 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 KIAA1456Q9P272 454 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 SPG11Q96JI7 2443 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 TRAV20A0A0B4J274 112 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 RAB19A4D1S5 217 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 ANKRD34BA5PLL1 514 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 FNDC10F2Z333 226 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 NPFFO15130 113 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 MPDU1O75352 247 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 FGF7P21781 194 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 CNTFRP26992 372 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 RPL27AP46776 148 aaKnown RBP10.01□□□□□ -0.81
SHMT2-233ENST00000557529 COMPP49747 757 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-233ENST00000557529 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.812e-7■■■□□ 15.5
SHMT2-233ENST00000557529 KRTAP10-9P60411 292 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 EBI3Q14213 229 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 PLGLAQ15195 96 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 MMDQ15546 238 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 TNXAQ16473 311 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 MRGPRG-AS1Q2M3A8 158 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 CENPVQ7Z7K6 275 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-233ENST00000557529 TMEM170AQ8WVE7 144 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 EAF1Q96JC9 268 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-233ENST00000557529 PSMG3-AS1Q96PY0 264 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 TPSG1Q9NRR2 321 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 WDR83OSQ9Y284 106 aa10.01□□□□□ -0.81
SHMT2-233ENST00000557529 USP9YO00507 2555 aaPredicted RBP10□□□□□ -0.81
SHMT2-233ENST00000557529 CENPVL3A0A0U1RRI6 287 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 C17orf112F2Z3M2 114 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 SOX15O60248 233 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 NDUFA3O95167 84 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
SHMT2-233ENST00000557529 RNASE2P10153 161 aaKnown RBP10□□□□□ -0.81
SHMT2-233ENST00000557529 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
SHMT2-233ENST00000557529 SAA4P35542 130 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 ZNF616Q08AN1 781 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 HES1Q14469 280 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 UQCC3Q6UW78 93 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 BTNL8Q6UX41 500 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 DYNAPQ8N1N2 210 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 COMMD1Q8N668 190 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 ZNF709Q8N972 641 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 OR10W1Q8NGF6 305 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 FAM213BQ8TBF2 198 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 MBD6Q96DN6 1003 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 RSG1Q9BU20 258 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 HRH4Q9H3N8 390 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 FBXL15Q9H469 300 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 FBXO7Q9Y3I1 522 aa10□□□□□ -0.81
SHMT2-233ENST00000557529 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
SHMT2-233ENST00000557529 IGHV1-69DA0A0B4J2H0 117 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 SMCO3A2RU48 225 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 CGB1A6NKQ9 187 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 I3L521 148 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 TSPAN15O95858 294 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 FAM106CPP0CH98 169 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 LOXL1Q08397 574 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-233ENST00000557529 HNF4GQ14541 408 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 TUSC1Q2TAM9 212 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 C10orf55Q5SWW7 151 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 Q8N6K4 173 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 LINC01356Q8N9X3 169 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 AJUBAQ96IF1 538 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
SHMT2-233ENST00000557529 SRSF8Q9BRL6 282 aaKnown RBP9.99□□□□□ -0.81
SHMT2-233ENST00000557529 TNCP24821 2201 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 E7EUB6 86 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 TEX46H3BTG2 121 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 MBP02144 154 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 OR13C7P0DN81 318 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 GNB1P62873 340 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 WT1-ASQ06250 92 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 LFNGQ8NES3 379 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 RNASEH2CQ8TDP1 164 aaKnown RBP9.98□□□□□ -0.81
SHMT2-233ENST00000557529 C17orf50Q8WW18 174 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms