RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 AREGP15514 252 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 SMCO1Q147U7 214 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 AKIRIN2Q53H80 203 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 ASPHD1Q5U4P2 390 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 COA4Q9NYJ1 87 aa11.02□□□□□ -0.65
VIPAS39-208ENST00000556412 C13orf42A0A1B0GVH6 325 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 CGB1A6NKQ9 187 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 MPTX1A8MV57 137 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 SSNA1O43805 119 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 FGF2P09038 288 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 PF4V1P10720 104 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 CRIP2P52943 208 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 HSPE1P61604 102 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 OXA1LQ15070 435 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 ZNF429Q86V71 674 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 MS4A10Q96PG2 267 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 ZNF257Q9Y2Q1 563 aa11.01□□□□□ -0.65
VIPAS39-208ENST00000556412 A0A1B0GU03 582 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 SNRPGP15A8MWD9 76 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 FBXO24O75426 580 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 CD28P10747 220 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 HOXA1P49639 335 aaPredicted RBP11□□□□□ -0.65
VIPAS39-208ENST00000556412 KRTAP10-3P60369 221 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 CFHR3Q02985 330 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 TEX38Q6PEX7 206 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 TMEM65Q6PI78 240 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 C19orf35Q6ZS72 473 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 MINDY2Q8NBR6 621 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 PLEKHA3Q9HB20 300 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 ZNF580Q9UK33 172 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 C5orf51A6NDU8 294 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 CEBPZOSA8MTT3 80 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 SOX15O60248 233 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 PRH1P02810 166 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 OR13C7P0DN81 318 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 PPIFP30405 207 aaKnown RBP11□□□□□ -0.65
VIPAS39-208ENST00000556412 PRCDQ00LT1 54 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
VIPAS39-208ENST00000556412 C19orf54Q5BKX5 351 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 TMEM68Q96MH6 324 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 ENY2Q9NPA8 101 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 ALG5Q9Y673 324 aa11□□□□□ -0.65
VIPAS39-208ENST00000556412 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 GOSR2O14653 212 aa10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 DEFA4P12838 97 aa10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 WT1-ASQ06250 92 aa10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 CXorf66Q5JRM2 361 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 OR5M8Q8NGP6 311 aa10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 FAM110DQ8TAY7 271 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 GSKIPQ9P0R6 139 aa10.99□□□□□ -0.65
VIPAS39-208ENST00000556412 A0A1W2PRX2 142 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 SCGB1D2O95969 90 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 IGHG4P01861 327 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 PSMB6P28072 239 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 SPCS3P61009 180 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 OR10C1Q96KK4 312 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 KLK15Q9H2R5 256 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 TCRBV4S1A1TA0A5B7 111 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 TRGV3P03979 118 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 RPLP1P05386 114 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 SLC25A6P12236 298 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 TPPP2P59282 170 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 DEFA5Q01523 94 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 FOXE3Q13461 319 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 TCTEX1D4Q5JR98 221 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 HSD17B13Q7Z5P4 300 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 TTC9CQ8N5M4 171 aa10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 WIPF2Q8TF74 440 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-208ENST00000556412 C7orf66A4D0T2 115 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 NPIPB5A8MRT5 1133 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 IGLV1-40P01703 118 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 ELANEP08246 267 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 PSMB8P28062 276 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 ERHP84090 104 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 C2orf68Q2NKX9 166 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 KRTAP21-3Q3LHN1 58 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 GSG1LQ6UXU4 331 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 OR52E5Q8NH55 327 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 ZNF747Q9BV97 191 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 MAGT1Q9H0U3 335 aa10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 HEYLQ9NQ87 328 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-208ENST00000556412 PITX3O75364 302 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 SIX6O95475 246 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 CTRB1P17538 263 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 SNCAP37840 140 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 RAB9AP51151 201 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 AARDQ4LEZ3 155 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 CTRB2Q6GPI1 263 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 C11orf87Q6NUJ2 197 aa10.96□□□□□ -0.65
VIPAS39-208ENST00000556412 ZBTB8BQ8NAP8 495 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms