RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CELSR3Q9NYQ7 3312 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 CTSGP08311 255 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNF22P17026 224 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 RPS3P23396 243 aaKnown RBP eCLIP2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 GADD45AP24522 165 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 RPL22P35268 128 aaKnown RBP2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 PSMD7P51665 324 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 RELAQ04206 551 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 POU6F1Q14863 301 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNHIT3Q15649 155 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 CDKL4Q5MAI5 379 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 HES3Q5TGS1 186 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 FAM151BQ6UXP7 276 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 C3orf62Q6ZUJ4 267 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 DEFB124Q8NES8 71 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 SKA2Q8WVK7 121 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 LCN9Q8WX39 176 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 SMIM12Q96EX1 92 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 MRPL16Q9NX20 251 aaKnown RBP2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 ARL5AQ9Y689 179 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 FRYLO94915 3013 aa2.5□□□□□ -2.01
CKS1BP1-201ENST00000555221 URB1O60287 2271 aaKnown RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 VPS13AQ96RL7 3174 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 NBEAQ8NFP9 2946 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 ABCA2Q9BZC7 2435 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 DOCK4Q8N1I0 1966 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 HELZP42694 1942 aaKnown RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 C2orf74A8MZ97 194 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 H3BQF6 201 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 KLRC4-KLRK1H3BQV0 150 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 SMLR1H3BR10 107 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 TP53I11O14683 189 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 NDUFS6O75380 124 aaKnown RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 C8GP07360 202 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 RD3LP0DJH9 198 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 F8A1P23610 371 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 GABRA3P34903 492 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 MARCKSL1P49006 195 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 SERPINB9P50453 376 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNF140P52738 457 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 TSPAN31Q12999 210 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR8G1Q15617 311 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 MAPK14Q16539 360 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 CLEC12BQ2HXU8 276 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 DEFB133Q30KQ1 61 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 TIMM23BQ5SRD1 257 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 N4BP2L1Q5TBK1 243 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 FAM45BPQ6NSW5 357 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 C8orf74Q6P047 294 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 EBLN2Q6P2I7 272 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 SPNS3Q6ZMD2 512 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 BOD1L2Q8IYS8 172 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 MMGT1Q8N4V1 131 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 TAMM41Q96BW9 452 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 CAPZA3Q96KX2 299 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 DDA1Q9BW61 102 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 SLC19A3Q9BZV2 496 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 POPDC3Q9HBV1 291 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 ACACAQ13085 2346 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 NBEAL1Q6ZS30 2694 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 ASCC3Q8N3C0 2202 aaKnown RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 LOC400499M0QZD8 3231 aa2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 YLPM1P49750 1951 aaKnown RBP2.49□□□□□ -2.01
CKS1BP1-201ENST00000555221 ATG2AQ2TAZ0 1938 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 DSPP15924 2871 aaKnown RBP2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 MYO16Q9Y6X6 1858 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 ASXL3Q9C0F0 2248 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 TLCD2A6NGC4 264 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 C21orf140B9A014 251 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 G3V3Q6 166 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 J3QRE1 110 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 TOR1AO14656 332 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 RBP1P09455 135 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 PIRTP0C851 137 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 MPC1LP0DKB6 136 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 CMPK1P30085 196 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 SULT1A2P50226 295 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 AKR1C2P52895 323 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 CCL7P80098 99 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 SPIN4Q56A73 249 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 SCXQ7RTU7 201 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 C2orf73Q8N5S3 287 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR7G1Q8NGA0 311 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR13C4Q8NGS5 318 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNRF2Q8NHG8 242 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 MFSD8Q8NHS3 518 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 STAG3L4Q8TBR4 150 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 CD200R1Q8TD46 325 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 GTSF1LQ9H1H1 148 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 PARVBQ9HBI1 364 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 IMP3Q9NV31 184 aaKnown RBP2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 FBXO5Q9UKT4 447 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 WASHC3Q9Y3C0 194 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 IGSF10Q6WRI0 2623 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 OBSL1O75147 1896 aa2.48□□□□□ -2.01
CKS1BP1-201ENST00000555221 FANCMQ8IYD8 2048 aa2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 TLN1Q9Y490 2541 aaKnown RBP2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 RP1L1Q8IWN7 2480 aaPredicted RBP2.47□□□□□ -2.01
CKS1BP1-201ENST00000555221 SPG11Q96JI7 2443 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms