RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 L3HYPDHQ96EM0 354 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 IMUPQ9GZP8 106 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 PAIP2BQ9ULR5 123 aaKnown RBP2.8□□□□□ -1.96
SCFD1-211ENST00000554437 AMMECR1Q9Y4X0 333 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-211ENST00000554437 DOCK9Q9BZ29 2069 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 NAV1Q8NEY1 1877 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 AHDC1Q5TGY3 1603 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-211ENST00000554437 TMEM269A0A1B0GVZ9 245 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 COLCA2A8K830 154 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 I3L521 148 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 FAM107AO95990 144 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 BLVRBP30043 206 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-211ENST00000554437 PIGPP57054 158 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
SCFD1-211ENST00000554437 HTR4Q13639 388 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 AMTNQ6UX39 209 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 TMEM86AQ8N2M4 240 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 PACRGLQ8N7B6 248 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 DAND5Q8N907 189 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 NUP35Q8NFH5 326 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 C2orf50Q96LR7 162 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 DOHHQ9BU89 302 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 TMEM126AQ9H061 195 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 EFCAB1Q9HAE3 211 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 LAMTOR3Q9UHA4 124 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 NUBP2Q9Y5Y2 271 aa2.79□□□□□ -1.96
SCFD1-211ENST00000554437 ERCC6Q03468 1493 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 ARAP1Q96P48 1450 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 SOGA1O94964 1423 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 BAZ2AQ9UIF9 1905 aaKnown RBP2.78□□□□□ -1.96
SCFD1-211ENST00000554437 PTPRJQ12913 1337 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 IGLV2-18A0A075B6J9 118 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 A0A087WX48 190 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 BORCS7-ASMTA0A0B4J1R7 106 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 DUXBA0A1W2PPF3 345 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 A6NED7 52 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 RFPL4AA6NLU0 287 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 A8MWP4 228 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 RFPL4AL1F8VTS6 287 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 J3KT08 172 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 UBE2L6O14933 153 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 IFNA10P01566 189 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 TRGV3P03979 118 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 COX4I1P13073 169 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 RPL30P62888 115 aaKnown RBP2.78□□□□□ -1.96
SCFD1-211ENST00000554437 ZNF616Q08AN1 781 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 OR8G1Q15617 311 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 MRPL51Q4U2R6 128 aaKnown RBP2.78□□□□□ -1.96
SCFD1-211ENST00000554437 Q5W150 140 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 ANGPTL5Q86XS5 388 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 ZFAND2AQ8N6M9 145 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 RNASE6Q93091 150 aaKnown RBP2.78□□□□□ -1.96
SCFD1-211ENST00000554437 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 TPT1P8Q9HAU6 139 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 KLK5Q9Y337 293 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-211ENST00000554437 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 CABIN1Q9Y6J0 2220 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 CEP170Q5SW79 1584 aa2.78□□□□□ -1.96
SCFD1-211ENST00000554437 PLA2R1Q13018 1463 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 FMN1Q68DA7 1419 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 UHRF1BP1Q6BDS2 1440 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 RFX7Q2KHR2 1363 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 CST8O60676 142 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 IGKV1D-33P01593 117 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 IGKV1-33P01594 117 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 DBIP07108 87 aaKnown RBP2.77□□□□□ -1.97
SCFD1-211ENST00000554437 RPL7P18124 248 aaKnown RBP2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BOP23527 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 NPPCP23582 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 CRYBB3P26998 211 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BBP33778 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 CSN1S1P47710 185 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BDP58876 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BCP62807 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 OR8B8Q15620 311 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST2H2BEQ16778 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-211ENST00000554437 RPL13AP3Q6NVV1 102 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 RPL22L1Q6P5R6 122 aaKnown RBP2.77□□□□□ -1.97
SCFD1-211ENST00000554437 AGTRAPQ6RW13 159 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 SSX8Q7RTT4 187 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HMGN2P46Q86SG4 172 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 CROCCP2Q86T23 111 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 LYPD1Q8N2G4 141 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 LRRC18Q8N456 261 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 OR13C4Q8NGS5 318 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 DNAJC9Q8WXX5 260 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 H1FXQ92522 213 aaKnown RBP2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BHQ93079 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 ADAT3Q96EY9 351 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BNQ99877 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 HIST1H2BMQ99879 126 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 RNF5Q99942 180 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 OR2J1Q9GZK6 312 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 LINC00574Q9H8X3 128 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 COPZ2Q9P299 210 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 SNX12Q9UMY4 172 aa2.77□□□□□ -1.97
SCFD1-211ENST00000554437 LINC00588Q9Y4M8 146 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms