RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FAM3BP58499 235 aaPredicted RBP9.83□□□□□ -0.84
PRPF39-204ENST00000553605 TAS2R43P59537 309 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 SSX1Q16384 188 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 SCARB1Q8WTV0 552 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 MAFIPQ8WZ33 124 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 SLC7A6OSQ96CW6 309 aaPredicted RBP9.83□□□□□ -0.84
PRPF39-204ENST00000553605 OR10C1Q96KK4 312 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 C18orf15Q96N68 181 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 SRSF8Q9BRL6 282 aaKnown RBP9.83□□□□□ -0.84
PRPF39-204ENST00000553605 RBMX2Q9Y388 322 aaKnown RBP9.83□□□□□ -0.84
PRPF39-204ENST00000553605 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 IRGMA1A4Y4 181 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 NUPL2O15504 423 aaKnown RBP9.82□□□□□ -0.84
PRPF39-204ENST00000553605 CTSGP08311 255 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 BRWD1-AS2P59051 145 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 RELQ04864 619 aaPredicted RBP9.82□□□□□ -0.84
PRPF39-204ENST00000553605 INSL4Q14641 139 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 Q56UQ5 140 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 RBM48Q5RL73 367 aaKnown RBP9.82□□□□□ -0.84
PRPF39-204ENST00000553605 CCDC197Q8NCU1 140 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 TCTEX1D2Q8WW35 142 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 DGCR14Q96DF8 476 aaKnown RBP9.82□□□□□ -0.84
PRPF39-204ENST00000553605 ZNF414Q96IQ9 312 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 HRASLSQ9HDD0 168 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 BET1LQ9NYM9 111 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 TMED3Q9Y3Q3 217 aa9.82□□□□□ -0.84
PRPF39-204ENST00000553605 TRAV2A0A0B4J234 112 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 LOC100130705A0A1B0GUX0 176 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 WBP4O75554 376 aaKnown RBP9.81□□□□□ -0.84
PRPF39-204ENST00000553605 IGLV2-14P01704 120 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 CD1AP06126 327 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 CD37P11049 281 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 RPL11P62913 178 aaKnown RBP9.81□□□□□ -0.84
PRPF39-204ENST00000553605 P2RY14Q15391 338 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 ACSM3Q53FZ2 586 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 ZNF66Q6ZN08 573 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 GDPD1Q8N9F7 314 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 DUSP18Q8NEJ0 188 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 OR10W1Q8NGF6 305 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 OR56B1Q8NGI3 324 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 PHYHIPQ92561 330 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 CENPOQ9BU64 300 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 YTHDF1Q9BYJ9 559 aaKnown RBP9.81□□□□□ -0.84
PRPF39-204ENST00000553605 SPATA2Q9UM82 520 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 KCNK7Q9Y2U2 307 aa9.81□□□□□ -0.84
PRPF39-204ENST00000553605 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 ST8SIA3O43173 380 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 SLC22A5O76082 557 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 EIF4EP06730 217 aaKnown RBP9.8□□□□□ -0.84
PRPF39-204ENST00000553605 SERPINE2P07093 398 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 TIMM50Q3ZCQ8 353 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 UBE2UQ5VVX9 321 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 LILRB2Q8N423 598 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 TMEM80Q96HE8 168 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 HSD17B10Q99714 261 aaKnown RBP9.8□□□□□ -0.84
PRPF39-204ENST00000553605 AIFM2Q9BRQ8 373 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 COMMD5Q9GZQ3 224 aa9.8□□□□□ -0.84
PRPF39-204ENST00000553605 HLA-DQB1P01920 261 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 OR13C7P0DN81 318 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 Q5VSD8 79 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 C1orf146Q5VVC0 180 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 LYPD1Q8N2G4 141 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 MFSD4AQ8N468 514 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 CBR4Q8N4T8 237 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 ST8SIA2Q92186 375 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
PRPF39-204ENST00000553605 VSIRQ9H7M9 311 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 RABAC1Q9UI14 185 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 OR2W1Q9Y3N9 320 aa9.79□□□□□ -0.84
PRPF39-204ENST00000553605 FAT1Q14517 4588 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 TRAV3A0A0B4J244 114 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 K7EIM0 57 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
PRPF39-204ENST00000553605 HTN3P15516 51 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 EMP1P54849 157 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 WT1-ASQ06250 92 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 EIF4EBP1Q13541 118 aaPredicted RBP9.78□□□□□ -0.84
PRPF39-204ENST00000553605 ACTL10Q5JWF8 245 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 FRZBQ92765 325 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 PLGRKTQ9HBL7 147 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 TAS2R8Q9NYW2 309 aa9.78□□□□□ -0.84
PRPF39-204ENST00000553605 F11RQ9Y624 299 aaKnown RBP9.78□□□□□ -0.84
PRPF39-204ENST00000553605 IGKV1D-8A0A087WSZ0 117 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 UPK2O00526 184 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 TRAPPC2P0DI81 140 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 TRAPPC2BP0DI82 140 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 NFYAP23511 347 aaPredicted RBP9.77□□□□□ -0.85
PRPF39-204ENST00000553605 TMEM88Q6PEY1 159 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 HSD17B13Q7Z5P4 300 aaPredicted RBP9.77□□□□□ -0.85
PRPF39-204ENST00000553605 ZNRF2Q8NHG8 242 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 RAB3CQ96E17 227 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 NIPSNAP3BQ9BS92 247 aa9.77□□□□□ -0.85
PRPF39-204ENST00000553605 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
PRPF39-204ENST00000553605 IGKV1D-13A0A0B4J2D9 117 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 TMEM189A5PLL7 270 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 J3QL48 77 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms