RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RBMX2Q9Y388 322 aaKnown RBP6.76□□□□□ -1.33
CHD4-212ENST00000545083 AGRNO00468 2067 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 IGHV3OR16-13A0A075B7E8 117 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 IGHV3-74A0A0B4J1X5 117 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 IGKV1D-13A0A0B4J2D9 117 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 IGHV7-4-1A0A0J9YVY3 117 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 SLC17A2O00624 439 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 CD74P04233 296 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 IGKV1-13P0DP09 117 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 MIFP14174 115 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 CMC4P56277 68 aaPredicted RBP6.75□□□□□ -1.33
CHD4-212ENST00000545083 WNT4P56705 351 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 DEFB131AP59861 70 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 TNP2Q05952 138 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
CHD4-212ENST00000545083 HSD17B12Q53GQ0 312 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 OR10W1Q8NGF6 305 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 OR4S2Q8NH73 311 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 VN1R17PQ8TDU5 208 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 TCTEX1D2Q8WW35 142 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 BSCL2Q96G97 398 aaPredicted RBP6.75□□□□□ -1.33
CHD4-212ENST00000545083 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 Q9H521 79 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
CHD4-212ENST00000545083 C15orf62A8K5M9 175 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 MFNGO00587 321 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 IFNA10P01566 189 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 HLA-DQB1P01920 261 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 UCHL1P09936 223 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 GNB3P16520 340 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 C4BPBP20851 252 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 NFYAP23511 347 aaPredicted RBP6.74□□□□□ -1.33
CHD4-212ENST00000545083 MRPS15P82914 257 aaKnown RBP6.74□□□□□ -1.33
CHD4-212ENST00000545083 TIMM50Q3ZCQ8 353 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 C1orf134Q5TEV5 83 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 SPSB3Q6PJ21 355 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 RAB3CQ96E17 227 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 C9orf16Q9BUW7 83 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 VCX3AQ9NNX9 186 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 PGPEP1Q9NXJ5 209 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 BET1LQ9NYM9 111 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 ELF5Q9UKW6 265 aaPredicted RBP6.74□□□□□ -1.33
CHD4-212ENST00000545083 SPATA2Q9UM82 520 aa6.74□□□□□ -1.33
CHD4-212ENST00000545083 AK6Q9Y3D8 172 aaKnown RBP6.74□□□□□ -1.33
CHD4-212ENST00000545083 A0A075B6Q4 140 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 TMEM272A0A1B0GTI8 110 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 K7EIM0 57 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 MYL12BO14950 172 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 DENRO43583 198 aaKnown RBP6.73□□□□□ -1.33
CHD4-212ENST00000545083 CTSGP08311 255 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 CD36P16671 472 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 HSPA13P48723 471 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 WT1-ASQ06250 92 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 RAB11BQ15907 218 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 C2orf76Q3KRA6 126 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 SOHLH1Q5JUK2 328 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 LAIR2Q6ISS4 152 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 SLC25A24Q6NUK1 477 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 ZFP1Q6P2D0 407 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 Q6ZS49 121 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
CHD4-212ENST00000545083 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 MFSD4AQ8N468 514 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 MS4A15Q8N5U1 240 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 NANOGP1Q8N7R0 232 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 GDPD1Q8N9F7 314 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 UBAC2Q8NBM4 344 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 CSNK1G2-AS1Q8NCQ2 148 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 SCARB1Q8WTV0 552 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 GIMAP1Q8WWP7 306 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 FAM3DQ96BQ1 224 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 CLEC5AQ9NY25 188 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 C21orf62Q9NYP8 219 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 TAS2R8Q9NYW2 309 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 THYN1Q9P016 225 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 OR2W1Q9Y3N9 320 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 VPS13BQ7Z7G8 4022 aa6.73□□□□□ -1.33
CHD4-212ENST00000545083 NUPL2O15504 423 aaKnown RBP6.72□□□□□ -1.33
CHD4-212ENST00000545083 HRASP01112 189 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 OR13C7P0DN81 318 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 HIST1H1DP16402 221 aaKnown RBP6.72□□□□□ -1.33
CHD4-212ENST00000545083 AHSA2Q719I0 299 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 TCF24Q7RTU0 167 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 CENPSQ8N2Z9 138 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 ZNF555Q8NEP9 628 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 OR10R2Q8NGX6 335 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 OR10C1Q96KK4 312 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 HSD17B10Q99714 261 aaKnown RBP6.72□□□□□ -1.33
CHD4-212ENST00000545083 MS4A6AQ9H2W1 248 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 S100A14Q9HCY8 104 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 HRASLSQ9HDD0 168 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
CHD4-212ENST00000545083 SMIM31A0A1B0GVY4 71 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 KNCNA6PVL3 124 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 UPK2O00526 184 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 CASQ2O14958 399 aaPredicted RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 DFFBO76075 338 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms