RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 BUB1B-PAK6H3BSN5 160 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 ATF4P18848 351 aaPredicted RBP13.47□□□□□ -0.25
CHFR-224ENST00000545046 OPRK1P41145 380 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 LGALS7P47929 136 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 PMS2P11Q13670 270 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 AWAT1Q58HT5 328 aa13.47□□□□□ -0.25
CHFR-224ENST00000545046 TNCP24821 2201 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 SPTBN1Q01082 2364 aaKnown RBP13.46□□□□□ -0.25
CHFR-224ENST00000545046 IGLV2-23P01705 113 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 SNRNP70P08621 437 aaKnown RBP13.46□□□□□ -0.25
CHFR-224ENST00000545046 FBP1P09467 338 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 COX7A1P24310 79 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 DLX1P56177 255 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 ERHP84090 104 aaKnown RBP13.46□□□□□ -0.25
CHFR-224ENST00000545046 C2orf83Q53S99 150 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 Q8N7P7 452 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 NDUFA4L2Q9NRX3 87 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.25
CHFR-224ENST00000545046 HRNRQ86YZ3 2850 aaPredicted RBP13.46□□□□□ -0.26
CHFR-224ENST00000545046 A0A1W2PN81 502 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 FNDC10F2Z333 226 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 CHRNA7P36544 502 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 CDKN1AP38936 164 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 RAB31Q13636 194 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 ARSJQ5FYB0 599 aaPredicted RBP13.45□□□□□ -0.26
CHFR-224ENST00000545046 TEPPQ6URK8 271 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 CYB561D1Q8N8Q1 229 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 RAB24Q969Q5 203 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 MGST2Q99735 147 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 SSBP3Q9BWW4 388 aaPredicted RBP13.45□□□□□ -0.26
CHFR-224ENST00000545046 VAX2Q9UIW0 290 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 PUS1Q9Y606 427 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHFR-224ENST00000545046 LOC105371242A0A075B767 164 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 C22orf46C9J442 243 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 GPR6P46095 362 aaPredicted RBP13.45□□□□□ -0.26
CHFR-224ENST00000545046 CDC34P49427 236 aaPredicted RBP13.45□□□□□ -0.26
CHFR-224ENST00000545046 MOB3BQ86TA1 216 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 P2RX4Q99571 388 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 SMCO4Q9NRQ5 59 aa13.45□□□□□ -0.26
CHFR-224ENST00000545046 IGHV3-72A0A0B4J1Y9 119 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 IGHV1-3A0A0C4DH29 117 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 C19orf84I3L1E1 186 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 HMGB3O15347 200 aaKnown RBP13.44□□□□□ -0.26
CHFR-224ENST00000545046 EIF3GO75821 320 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHFR-224ENST00000545046 PRB3Q04118 309 aaPredicted RBP13.44□□□□□ -0.26
CHFR-224ENST00000545046 PNKDQ8N490 385 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 OR10W1Q8NGF6 305 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 C20orf24Q9BUV8 137 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 GGTLC1Q9BX51 225 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 PKD1L2Q7Z442 2459 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 A0A1W2PPV4 95 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 SLC25A17O43808 307 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 ARF6P62330 175 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 RPEQ96AT9 228 aa13.44□□□□□ -0.26
CHFR-224ENST00000545046 ZNF430Q9H8G1 570 aaPredicted RBP13.44□□□□□ -0.26
CHFR-224ENST00000545046 LSM4Q9Y4Z0 139 aaKnown RBP13.44□□□□□ -0.26
CHFR-224ENST00000545046 SEC14L6B5MCN3 397 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 INS-IGF2F8WCM5 200 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 RNASE2P10153 161 aaKnown RBP13.43□□□□□ -0.26
CHFR-224ENST00000545046 TAGLN2P37802 199 aaKnown RBP13.43□□□□□ -0.26
CHFR-224ENST00000545046 PSMB3P49720 205 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 RHEBQ15382 184 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 BSXQ3C1V8 233 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 TEX45Q8NA69 505 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 OR4P4Q8NGL7 312 aa13.43□□□□□ -0.26
CHFR-224ENST00000545046 A6NNC1 897 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 H3BQ15 152 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 M0R1W7 72 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 MIC13Q5XKP0 118 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 RITA1Q96K30 269 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 NIPSNAP3BQ9BS92 247 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 MANBALQ9NQG1 85 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 DCHS2Q6V1P9 2916 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 AKR1C3P42330 323 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 SLC35E3Q7Z769 313 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 IQCF2Q8IXL9 164 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 C1orf159Q96HA4 380 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 TMPRSS5Q9H3S3 457 aa13.42□□□□□ -0.26
CHFR-224ENST00000545046 YIF1AO95070 293 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 EFNA4P52798 201 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHFR-224ENST00000545046 SSMEM1Q8WWF3 244 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 IGFBP2P18065 325 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 B2MP61769 119 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 GCSAMLQ5JQS6 135 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 TMEM144Q7Z5S9 345 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 TVP23CQ96ET8 276 aa13.41□□□□□ -0.26
CHFR-224ENST00000545046 E7EUB6 86 aa13.4□□□□□ -0.26
CHFR-224ENST00000545046 LY6LH3BQJ8 138 aa13.4□□□□□ -0.26
CHFR-224ENST00000545046 NDUFS7O75251 213 aa13.4□□□□□ -0.26
CHFR-224ENST00000545046 RPL29P47914 159 aaKnown RBP13.4□□□□□ -0.26
CHFR-224ENST00000545046 MRPL41Q8IXM3 137 aaKnown RBP13.4□□□□□ -0.26
CHFR-224ENST00000545046 MMD2Q8IY49 270 aa13.4□□□□□ -0.26
CHFR-224ENST00000545046 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
CHFR-224ENST00000545046 SIRT7Q9NRC8 400 aa13.4□□□□□ -0.26
CHFR-224ENST00000545046 ACTL6BO94805 426 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms