RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 AUNIPQ9H7T9 357 aa4.41□□□□□ -1.7
SUDS3-202ENST00000541280 RANGRFQ9HD47 186 aaPredicted RBP4.41□□□□□ -1.7
SUDS3-202ENST00000541280 RBMX2Q9Y388 322 aaKnown RBP4.41□□□□□ -1.7
SUDS3-202ENST00000541280 C13orf42A0A1B0GVH6 325 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 SMIM30A4D0T7 59 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 I3L521 148 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 CYB5BO43169 146 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 RBFOX2O43251 390 aaKnown RBP eCLIP4.4□□□□□ -1.71
SUDS3-202ENST00000541280 SLC25A17O43808 307 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 FCGR3BO75015 233 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 DHFRP00374 187 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 IGLV2-23P01705 113 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 APOA1P02647 267 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 LGALS1P09382 135 aaKnown RBP4.4□□□□□ -1.71
SUDS3-202ENST00000541280 ZP3P21754 424 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 NFYAP23511 347 aaPredicted RBP4.4□□□□□ -1.71
SUDS3-202ENST00000541280 FCGR2CP31995 323 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 PRSS3P35030 304 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 CATR1Q13166 79 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 CDK10Q15131 360 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 PRSS8Q16651 343 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 ECSCRQ19T08 205 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 TMEM69Q5SWH9 247 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 MMD2Q8IY49 270 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 CMTM1Q8IZ96 169 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 SAMD12Q8N8I0 201 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 LFNGQ8NES3 379 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 OR13F1Q8NGS4 319 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 OR5H6Q8NGV6 325 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 OR6F1Q8NGZ6 308 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 MAFIPQ8WZ33 124 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 SLC25A38Q96DW6 304 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 CLCC1Q96S66 551 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 PHB2Q99623 299 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.71
SUDS3-202ENST00000541280 FUNDC2Q9BWH2 189 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 SCPEP1Q9HB40 452 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 IFT46Q9NQC8 304 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF355PQ9NSJ1 428 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 RABL2AQ9UBK7 228 aaPredicted RBP4.4□□□□□ -1.71
SUDS3-202ENST00000541280 RABL2BQ9UNT1 228 aa4.4□□□□□ -1.71
SUDS3-202ENST00000541280 IGHV4OR15-8A0A075B7B6 117 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 IGKV1D-8A0A087WSZ0 117 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 MSGN1A6NI15 193 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 CBY3A6NI87 242 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 SRRM4A7MD48 611 aaKnown RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 SEC14L6B5MCN3 397 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 SSX5O60225 188 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 OR2A4O95047 310 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 CRYZL1O95825 349 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 HPRT1P00492 218 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 PPYP01298 95 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 TRGV3P03979 118 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 OR9G9P0C7N8 305 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF182P17025 639 aaPredicted RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 RAB25P57735 213 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 TPPP2P59282 170 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 TAS2R31P59538 309 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 HERV-K104P61576 105 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 DEFB121Q5J5C9 76 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 HIST2H2BDQ6DRA6 164 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 THOC7Q6I9Y2 204 aaKnown RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 KCTD9Q7L273 389 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 HSD17B13Q7Z5P4 300 aaPredicted RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 TTC9CQ8N5M4 171 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 GRPEL2Q8TAA5 225 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 TCTEX1D2Q8WW35 142 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 CYYR1Q96J86 154 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 OR2A7Q96R45 310 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 OR4C12Q96R67 309 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 BCL7BQ9BQE9 202 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 MRPS26Q9BYN8 205 aaKnown RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 SLC5A7Q9GZV3 580 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 RNF167Q9H6Y7 350 aa4.39□□□□□ -1.71
SUDS3-202ENST00000541280 FAM212BQ9NTI7 297 aaPredicted RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 ELF5Q9UKW6 265 aaPredicted RBP4.39□□□□□ -1.71
SUDS3-202ENST00000541280 OVOL1O14753 267 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 SOX15O60248 233 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 GABARAPO95166 117 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 NQO2P16083 231 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
SUDS3-202ENST00000541280 TBPP20226 339 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 TAS2R20P59543 309 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 TSPAN5P62079 268 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 LSM3P62310 102 aaKnown RBP4.38□□□□□ -1.71
SUDS3-202ENST00000541280 GNB1P62873 340 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 NDPQ00604 133 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 EIF4EBP1Q13541 118 aaPredicted RBP4.38□□□□□ -1.71
SUDS3-202ENST00000541280 TNXAQ16473 311 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 POU2AF1Q16633 256 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 GPR141Q7Z602 305 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 TMEM17Q86X19 198 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 GVQW1Q8N7I0 195 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 NECAP1Q8NC96 275 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 OR5T1Q8NG75 326 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 OR6Q1Q8NGQ2 317 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 OR5H2Q8NGV7 314 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms