RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 SPATA2Q9UM82 520 aa10.31□□□□□ -0.76
PBX3-212ENST00000538998 IGKV1D-8A0A087WSZ0 117 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 RAB27BO00194 218 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
PBX3-212ENST00000538998 IGLV2-14P01704 120 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 CTXN2P0C2S0 81 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 SMIM18P0DKX4 95 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 OR2B8PP59922 312 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 PLA2G7Q13093 441 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 TMEM187Q14656 261 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 ZNF124Q15973 351 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 TIMM50Q3ZCQ8 353 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 ATP6V0BQ99437 205 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 HRASLSQ9HDD0 168 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 SSR3Q9UNL2 185 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 ETV7Q9Y603 341 aa10.3□□□□□ -0.76
PBX3-212ENST00000538998 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 C15orf62A8K5M9 175 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 NFYAP23511 347 aaPredicted RBP10.29□□□□□ -0.76
PBX3-212ENST00000538998 DTYMKP23919 212 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 BRWD1-AS2P59051 145 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 EIF4EBP1Q13541 118 aaPredicted RBP10.29□□□□□ -0.76
PBX3-212ENST00000538998 ZNF66Q6ZN08 573 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 TMEM91Q6ZNR0 172 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 MFSD4AQ8N468 514 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 NDUFB11Q9NX14 153 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 V9GY05 133 aa10.29□□□□□ -0.76
PBX3-212ENST00000538998 IGHV3OR16-8A0A075B7F1 116 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 IGKV1D-13A0A0B4J2D9 117 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 RTL8CO15255 209 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 ZNF207O43670 478 aaKnown RBP10.28□□□□□ -0.76
PBX3-212ENST00000538998 IGKV1-13P0DP09 117 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 FABP5Q01469 135 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 ARL6IP1Q15041 203 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 HES5Q5TA89 166 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 PVRIGQ6DKI7 326 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 GPR141Q7Z602 305 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 CENPSQ8N2Z9 138 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 GDPD1Q8N9F7 314 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 Q8NAQ8 132 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 RNF2Q99496 336 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 CHRDL1Q9BU40 450 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 COMMD5Q9GZQ3 224 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 TAS2R8Q9NYW2 309 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
PBX3-212ENST00000538998 LOC100506127A0A0U1RQW1 187 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 TRDV1A0A1B0GX56 115 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 METTL21EPA6NDL7 271 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 C15orf61A6NNL5 157 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 FGF2P09038 288 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 RAB6AP20340 208 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 MYL9P24844 172 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
PBX3-212ENST00000538998 TFPI2P48307 235 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 THOC7Q6I9Y2 204 aaKnown RBP10.27□□□□□ -0.77
PBX3-212ENST00000538998 CMTM3Q96MX0 182 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 RNF126Q9BV68 326 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 RHPN1-AS1Q9BWJ2 59 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 QTRT1Q9BXR0 403 aaKnown RBP10.27□□□□□ -0.77
PBX3-212ENST00000538998 C21orf62Q9NYP8 219 aa10.27□□□□□ -0.77
PBX3-212ENST00000538998 MUC4Q99102 2169 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 IGHV7-4-1A0A0J9YVY3 117 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 CHEK1O14757 476 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 P0DMU3 169 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 RPL5P46777 297 aaKnown RBP10.26□□□□□ -0.77
PBX3-212ENST00000538998 TAS2R31P59538 309 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 C22orf42Q6IC83 251 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 Q6ZTC4 211 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
PBX3-212ENST00000538998 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 FAT2Q9NYQ8 4349 aa10.26□□□□□ -0.77
PBX3-212ENST00000538998 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 UPK2O00526 184 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 RBFOX2O43251 390 aaKnown RBP eCLIP10.25□□□□□ -0.77
PBX3-212ENST00000538998 AMBPP02760 352 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 SERPINE2P07093 398 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 MIFP14174 115 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 PAFAH1B2P68402 229 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
PBX3-212ENST00000538998 SLC25A24Q6NUK1 477 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 CNIH2Q6PI25 160 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 SPAG16Q8N0X2 631 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 UBAC2Q8NBM4 344 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 OR10W1Q8NGF6 305 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 OR13F1Q8NGS4 319 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 YIPF6Q96EC8 236 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 DCSTAMPQ9H295 470 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
PBX3-212ENST00000538998 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
PBX3-212ENST00000538998 F8W735 103 aaPredicted RBP10.24□□□□□ -0.77
PBX3-212ENST00000538998 PDCD5O14737 125 aa10.24□□□□□ -0.77
PBX3-212ENST00000538998 CD5P06127 495 aa10.24□□□□□ -0.77
PBX3-212ENST00000538998 RBMY1A1P0DJD3 496 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms