RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CNPY1Q3B7I2 92 aa10.31□□□□□ -0.76
SMARCA4-206ENST00000538456 LAMTOR1Q6IAA8 161 aa10.31□□□□□ -0.76
SMARCA4-206ENST00000538456 RARRES2Q99969 163 aa10.31□□□□□ -0.76
SMARCA4-206ENST00000538456 C20orf24Q9BUV8 137 aa10.31□□□□□ -0.76
SMARCA4-206ENST00000538456 MFFQ9GZY8 342 aa10.31□□□□□ -0.76
SMARCA4-206ENST00000538456 NAA50Q9GZZ1 169 aaKnown RBP10.31□□□□□ -0.76
SMARCA4-206ENST00000538456 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 H3BMQ9 156 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 DEFB4AO15263 64 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 TGOLN2O43493 480 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 TNFSF12O43508 249 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 SLC22A5O76082 557 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 DTYMKP23919 212 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 PSMA1P25786 263 aaKnown RBP10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 OR2B8PP59922 312 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 EIF4EBP1Q13541 118 aaPredicted RBP10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 SSX1Q16384 188 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 TIMM50Q3ZCQ8 353 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 MFSD4AQ8N468 514 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 CD300LFQ8TDQ1 290 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 C6orf62Q9GZU0 229 aaPredicted RBP10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 ATG5Q9H1Y0 275 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 NDUFB11Q9NX14 153 aa10.3□□□□□ -0.76
SMARCA4-206ENST00000538456 IGHV3-21A0A0B4J1V1 117 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 METTL21EPA6NDL7 271 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 IFITM5A6NNB3 132 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 CTSDP07339 412 aaPredicted RBP10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 RAB6AP20340 208 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 PTBP1P26599 531 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 CTF1Q16619 201 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 OR11H2Q8NH07 326 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 C2CD4CQ8TF44 421 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 NUDCD2Q8WVJ2 157 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 CSTL1Q9H114 145 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 BET1LQ9NYM9 111 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 PTTG2Q9NZH5 202 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 THYN1Q9P016 225 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 ABCA13Q86UQ4 5058 aa10.29□□□□□ -0.76
SMARCA4-206ENST00000538456 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 MPTX1A8MV57 137 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 CTXN2P0C2S0 81 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 TFPI2P48307 235 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 CDNFQ49AH0 187 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 SPAG16Q8N0X2 631 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 OR10W1Q8NGF6 305 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 OR4A5Q8NH83 315 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 COMMD5Q9GZQ3 224 aa10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-206ENST00000538456 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 IGLL5B9A064 214 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 PDCD5O14737 125 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 XRCC3O43542 346 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 HACD4Q5VWC8 232 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 ZNF66Q6ZN08 573 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 UBAC2Q8NBM4 344 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 VN1R17PQ8TDU5 208 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 SECTM1Q8WVN6 248 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 BSCL2Q96G97 398 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 CHRDL1Q9BU40 450 aa10.27□□□□□ -0.77
SMARCA4-206ENST00000538456 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 SMIM30A4D0T7 59 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 SULT1C2O00338 296 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 NDUFA4O00483 81 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 CYB5BO43169 146 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 OR13C7P0DN81 318 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 ARL6IP1Q15041 203 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 SLC25A24Q6NUK1 477 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 CNIH2Q6PI25 160 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 GDPD1Q8N9F7 314 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 RNF2Q99496 336 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 QTRT1Q9BXR0 403 aaKnown RBP10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 CCL28Q9NRJ3 127 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 MUC4Q99102 2169 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 FAT2Q9NYQ8 4349 aa10.26□□□□□ -0.77
SMARCA4-206ENST00000538456 UPK2O00526 184 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 CA1P00915 261 aaPredicted RBP10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 PTHLHP12272 177 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 RAB3BP20337 219 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 MYL9P24844 172 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 MFAP2P55001 183 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 TCTAP57738 103 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 GNG2P59768 71 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 NCS1P62166 190 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 SPCS2Q15005 226 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 SPSB3Q6PJ21 355 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 AIFM2Q9BRQ8 373 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 DCSTAMPQ9H295 470 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 TMEM140Q9NV12 185 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 C21orf62Q9NYP8 219 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 ANXA10Q9UJ72 324 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 SSR3Q9UNL2 185 aa10.25□□□□□ -0.77
SMARCA4-206ENST00000538456 DNAH2Q9P225 4427 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 TRAV1-2A0A0B4J238 106 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 LOC100506127A0A0U1RQW1 187 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 TRDV1A0A1B0GX56 115 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 SERPINE2P07093 398 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 FGF9P31371 208 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 ADMP35318 185 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms