RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 PARP11Q9NR21 331 aa8.69□□□□□ -1.02
AC087235.1-201ENST00000538297 ZFP57Q9NU63 452 aa8.69□□□□□ -1.02
AC087235.1-201ENST00000538297 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
AC087235.1-201ENST00000538297 A0A1B0GU03 582 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 MSGN1A6NI15 193 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 C15orf61A6NNL5 157 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 ATP6V0E1O15342 81 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 LY86O95711 162 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 IFNA21P01568 189 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 TRAPPC2P0DI81 140 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 TRAPPC2BP0DI82 140 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 EGR2P11161 476 aaPredicted RBP8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 PPIFP30405 207 aaKnown RBP8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 RPL27AP46776 148 aaKnown RBP8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 HSPE1P61604 102 aaKnown RBP8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 C19orf54Q5BKX5 351 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 FAM209BQ5JX69 171 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 ABHD5Q8WTS1 349 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 MITD1Q8WV92 249 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 CLCC1Q96S66 551 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 PDCD10Q9BUL8 212 aa8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 QTRT1Q9BXR0 403 aaKnown RBP8.68□□□□□ -1.02
AC087235.1-201ENST00000538297 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 SNRPGP15A8MWD9 76 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 INS-IGF2F8WCM5 200 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 IGKV1-5P01602 117 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 ATP5IP56385 69 aaPredicted RBP8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 OR2B8PP59922 312 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 GNB1P62873 340 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 SSBP2P81877 361 aaPredicted RBP8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 CFHR3Q02985 330 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 PDLIM3Q53GG5 364 aaPredicted RBP8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 CXorf66Q5JRM2 361 aaPredicted RBP8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 TMEM65Q6PI78 240 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 UNQ5815/PRO19632Q6UWF5 114 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 SLC35G3Q8N808 338 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 LFNGQ8NES3 379 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 GRPEL2Q8TAA5 225 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 ZNF431Q8TF32 576 aaPredicted RBP8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 CITED1Q99966 193 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 NDUFA4L2Q9NRX3 87 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 FLVCR2Q9UPI3 526 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 OR51B2Q9Y5P1 312 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 PLXNB1O43157 2135 aa8.67□□□□□ -1.02
AC087235.1-201ENST00000538297 TRAV6A0A075B6T7 132 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 A0A0B4J293 547 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 TEX50A0A1B0GTY4 177 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 A0A1W2PN81 502 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 FAM90A26D6RGX4 464 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 INMT-MINDY4F8WBC2 141 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 SULT1A3P0DMM9 295 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 SULT1A4P0DMN0 295 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 HIST1H1BP16401 226 aaKnown RBP8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 ANXA7P20073 488 aaKnown RBP8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 PSMB8P28062 276 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 CHRNA7P36544 502 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 SPCS3P61009 180 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 CD83Q01151 205 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 SMCO1Q147U7 214 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 RGS21Q2M5E4 152 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 KLK9Q2XQG4 91 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 NMSQ5H8A3 153 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 LHFPL5Q8TAF8 219 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 NOL4LQ96MY1 436 aaPredicted RBP8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 KLK9Q9UKQ9 250 aa8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
AC087235.1-201ENST00000538297 A0A0G2JLM5 398 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 CRYGCP07315 174 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 CDX1P47902 265 aaPredicted RBP8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 ERHP84090 104 aaKnown RBP8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 NDPQ00604 133 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 PRCDQ00LT1 54 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 ANKRD55Q3KP44 614 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 LYZL2Q7Z4W2 148 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 NOXA1Q86UR1 476 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 NDUFA11Q86Y39 141 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 FAM110DQ8TAY7 271 aaPredicted RBP8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 CASTOR1Q8WTX7 329 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 USMG5Q96IX5 58 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 UBE2E2Q96LR5 201 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 THYN1Q9P016 225 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 WSB1Q9Y6I7 421 aa8.65□□□□□ -1.02
AC087235.1-201ENST00000538297 hCG_2014768A0A024R1R8 64 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 TRAV3A0A0B4J244 114 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 DBX1A6NMT0 343 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 TEX22C9J3V5 150 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 G3V318 75 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 MED6O75586 246 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 IFNA17P01571 189 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 PSMB6P28072 239 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 RAB9AP51151 201 aa8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 SUB1P53999 127 aaKnown RBP eCLIP8.64□□□□□ -1.03
AC087235.1-201ENST00000538297 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms