RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TMEM183AQ8IXX5 376 aa15.32■□□□□ 0.04
SFSWAP-203ENST00000535236 PMCHL2Q9BQD1 86 aa15.32■□□□□ 0.04
SFSWAP-203ENST00000535236 CBLN4Q9NTU7 201 aa15.32■□□□□ 0.04
SFSWAP-203ENST00000535236 UBR3Q6ZT12 1888 aa15.32■□□□□ 0.04
SFSWAP-203ENST00000535236 EGR1P18146 543 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 ICE1Q9Y2F5 2266 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 GRIFINA4D1Z8 144 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 PAX1P15863 534 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 TM2D1Q9BX74 207 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 PRSS22Q9GZN4 317 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 ZNF414Q96IQ9 312 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 WNT10AQ9GZT5 417 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 IQCF6A8MYZ5 107 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 CGAP01215 116 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 SAMD13Q5VXD3 122 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 CFAP161Q6P656 301 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 OR52E5Q8NH55 327 aa15.31■□□□□ 0.04
SFSWAP-203ENST00000535236 LY75O60449 1722 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 SOD3P08294 240 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 MYOD1P15172 320 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 TMEM105Q8N8V8 129 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 TOMM7Q9P0U1 55 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 ASXL3Q9C0F0 2248 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 RPRMQ9NS64 109 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 PROB1E7EW31 1015 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 FHITP49789 147 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 STHQ8IWL8 128 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 MRPS18CQ9Y3D5 142 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 PEX7O00628 323 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 TDGF1P13385 188 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 IMMP1LQ96LU5 166 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 C18orf15Q96N68 181 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 MSGN1A6NI15 193 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 CELA3BP08861 270 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 FMC1Q96HJ9 113 aa15.3■□□□□ 0.04
SFSWAP-203ENST00000535236 DLEC1Q9Y238 1755 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 IGKV1D-43A0A0B4J1Z2 117 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 TRAV8-6A0A0B4J262 113 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 CSRP1P21291 193 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 RNASEH2CQ8TDP1 164 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 SCGB3A1Q96QR1 104 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 COL4A5P29400 1685 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 NBR2O15453 112 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 METRNQ9UJH8 293 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 IGLV3-19P01714 112 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 FOXA3P55318 350 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 ATOH7Q8N100 152 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 TFF3Q07654 80 aa15.29■□□□□ 0.04
SFSWAP-203ENST00000535236 OR11H4Q8NGC9 324 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 COL24A1Q17RW2 1714 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 VENTXO95231 258 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 REPIN1Q9BWE0 567 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 DMRTA2Q96SC8 542 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 MUC21A0A0G2JKD1 596 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 MUC21A0A140T8X8 626 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 MUC21Q5SSG8 566 aa15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 MRPL14Q6P1L8 145 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 ZNFX1Q9P2E3 1918 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-203ENST00000535236 LDLRAD2Q5SZI1 272 aa15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 RCC1LQ96I51 464 aaKnown RBP15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 KCNS1Q96KK3 526 aa15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 UMODP07911 640 aa15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 HOXA5P20719 270 aa15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 TBR1Q16650 682 aa15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 CBLN1P23435 193 aa15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 ZXDCQ2QGD7 858 aaPredicted RBP15.27■□□□□ 0.04
SFSWAP-203ENST00000535236 ZNF98A6NK75 572 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 ATP5LO75964 103 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 THBDP07204 575 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 ZNF506Q5JVG8 444 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 CACNG8Q8WXS5 425 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 WFIKKN1Q96NZ8 548 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 CCL3L1P16619 93 aa15.27■□□□□ 0.03
SFSWAP-203ENST00000535236 A0A0G2JK05 382 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 LTBRP36941 435 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 CIARTQ8N365 385 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 TMEM167AQ8TBQ9 72 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 A0A1B0GUT8 65 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 TGFBR3LH3BV60 316 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 SMIM13P0DJ93 91 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 LEPP41159 167 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 TTC32Q5I0X7 151 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 APOHP02749 345 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 CNTFRP26992 372 aa15.26■□□□□ 0.03
SFSWAP-203ENST00000535236 MALP21145 153 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 LHX2P50458 406 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 TNS1Q9HBL0 1735 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 RP1P56715 2156 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 UCP1P25874 307 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 FAM71F2Q6NXP2 309 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 LRTM2Q8N967 370 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 FER1L6-AS1Q8NA97 138 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 RPP21Q9H633 154 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 SAA1P0DJI8 122 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 Q9H3A6 140 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 JKAMPQ9P055 326 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 C8orf46Q8TAG6 207 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 CABIN1Q9Y6J0 2220 aa15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-203ENST00000535236 TCRBV4S1A1TA0A5B7 111 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms