RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SPI1P17947 270 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 HLA-DMBP28068 263 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 RANBP1P43487 201 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 RPL30P62888 115 aaKnown RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 LRRC26Q2I0M4 334 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 CAVIN4Q5BKX8 364 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 CDKL4Q5MAI5 379 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 HAGHLQ6PII5 290 aaPredicted RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 Q6ZT83 130 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 DEFB128Q7Z7B8 93 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 ARL17AQ8IVW1 177 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 TBC1D19Q8N5T2 526 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 COMMD1Q8N668 190 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 ZNF321PQ8N8H1 164 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 OR52K2Q8NGK3 314 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 Q8WTZ3 238 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 RAB2BQ8WUD1 216 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 ANKRD7Q92527 254 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 CIDECQ96AQ7 238 aaPredicted RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 TLCD1Q96CP7 247 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 ERMAPQ96PL5 475 aaPredicted RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 COMMD9Q9P000 198 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 CKLFQ9UBR5 152 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 MUC17Q685J3 4493 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 DNAH6Q9C0G6 4158 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 ZDBF2Q9HCK1 2354 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 AKAP13Q12802 2813 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 MAP3K19Q56UN5 1328 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 DNAH3Q8TD57 4116 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 TRAV12-1A0A0B4J245 112 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 SUPT3HB4E1H0 165 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 hCG_2039718K7EN88 272 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 MPHOSPH10O00566 681 aaKnown RBP-0.82□□□□□ -2.54
COPB1-212ENST00000534771 LYZL6O75951 148 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 UBL3O95164 117 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 IGKV1-5P01602 117 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 C1QAP02745 245 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 KRT7P08729 469 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 RPS4Y1P22090 263 aaKnown RBP-0.82□□□□□ -2.54
COPB1-212ENST00000534771 F8A1P23610 371 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 DAD1P61803 113 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 STX5Q13190 355 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 LINC01554Q52M75 96 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 MESTQ5EB52 335 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 LCN8Q6JVE9 175 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 SSX8Q7RTT4 187 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 TMEM251Q8N6I4 163 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 PLAC4Q8WY50 150 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 TMEM106AQ96A25 262 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 TMEM147Q9BVK8 224 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 MAP1LC3CQ9BXW4 147 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 PRRG3Q9BZD7 231 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 IQCGQ9H095 443 aaKnown RBP-0.82□□□□□ -2.54
COPB1-212ENST00000534771 RAB1BQ9H0U4 201 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 EXO5Q9H790 373 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 NCOR1O75376 2440 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 TEX15Q9BXT5 2789 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 PIEZO2Q9H5I5 2752 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 RIC1Q4ADV7 1423 aa-0.82□□□□□ -2.54
COPB1-212ENST00000534771 CACNA1HO95180 2353 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CELSR3Q9NYQ7 3312 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 GGT3PA6NGU5 568 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 FXYD1O00168 92 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CASQ2O14958 399 aaPredicted RBP-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CCL16O15467 120 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 SULT1B1O43704 296 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 PROSCO94903 275 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 TCL1BO95988 128 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 HTR1AP08908 422 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 BAALC-AS2P0C853 105 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 ADORA1P30542 326 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 AGTR1P30556 359 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CSN1S1P47710 185 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CD151P48509 253 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 AQP5P55064 265 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 HLA-DRB3P79483 266 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CLEC12BQ2HXU8 276 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 AADACL4Q5VUY2 407 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 Q6ZQT0 140 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CRLF3Q8IUI8 442 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 KIFC1Q9BW19 673 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 UGT2B28Q9BY64 529 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 ULBP3Q9BZM4 244 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CHRAC1Q9NRG0 131 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 PRELID1Q9Y255 219 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.83□□□□□ -2.54
COPB1-212ENST00000534771 PKD1L1Q8TDX9 2849 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 CHD3Q12873 2000 aaKnown RBP-0.83□□□□□ -2.54
COPB1-212ENST00000534771 BCL9O00512 1426 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 DNAH2Q9P225 4427 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 PKHD1L1Q86WI1 4243 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 JMJD1CQ15652 2540 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 PTPN13Q12923 2485 aa-0.83□□□□□ -2.54
COPB1-212ENST00000534771 IGHV1-58A0A0C4DH39 117 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 ODAMA1E959 279 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 NUPR1O60356 82 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 SC5DO75845 299 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 ARL6IP5O75915 188 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 YEATS4O95619 227 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 CRYGAP11844 174 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms