RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-215	ENST00000533145	PRSS54	Q6PEW0	395 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	SRSF12	Q8WXF0	261 aa	Known RBP	11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	SMIM8	Q96KF7	97 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	CIB3	Q96Q77	187 aa	Predicted RBP	11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	TEX22	C9J3V5	150 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	WRB	O00258	174 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	GPR137B	O60478	399 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	CNIH1	O95406	144 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	SCGB1D2	O95969	90 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	RNASE1	P07998	156 aa	Known RBP	11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	EGR2	P11161	476 aa	Predicted RBP	11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	PAX9	P55771	341 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	BLCAP	P62952	87 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	C10orf55	Q5SWW7	151 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	DTD1	Q8TEA8	209 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	TMEM68	Q96MH6	324 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	HSPB9	Q9BQS6	159 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	MAGT1	Q9H0U3	335 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	ZNF580	Q9UK33	172 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	LSM5	Q9Y4Y9	91 aa	Known RBP	11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	WSB1	Q9Y6I7	421 aa		11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	NIPBL	Q6KC79	2804 aa	eCLIP	11.14	□□□□□ -0.63
HIF3A-215	ENST00000533145	FN1	P02751	2386 aa	Known RBP	11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	MSGN1	A6NI15	193 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	CEBPZOS	A8MTT3	80 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145		E5RGE8	158 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	KCNAB3	O43448	404 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	NXPH3	O95157	252 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	C1QB	P02746	253 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	PVALB	P20472	110 aa	Predicted RBP	11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	ATP5I	P56385	69 aa	Predicted RBP	11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	S100A10	P60903	97 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	NDP	Q00604	133 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	CD300C	Q08708	224 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	LRRC37A5P	Q49AS3	106 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	TMEM65	Q6PI78	240 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	MRPL41	Q8IXM3	137 aa	Known RBP	11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145		Q8N2B8	174 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	SGMS2	Q8NHU3	365 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	THAP6	Q8TBB0	222 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	ARPC1A	Q92747	370 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	PPP1R14B	Q96C90	147 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	NPFFR1	Q9GZQ6	430 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	HIPK2	Q9H2X6	1198 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	PLEKHA3	Q9HB20	300 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	TNFRSF19	Q9NS68	423 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	FBN3	Q75N90	2809 aa		11.13	□□□□□ -0.63
HIF3A-215	ENST00000533145	IGLC7	A0M8Q6	106 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	HMSD	A8MTL9	139 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	TSC22D2	O75157	780 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	TMEM50A	O95807	157 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	OPN1MW	P04001	364 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	IGF1	P05019	195 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	OPN1MW2	P0DN77	364 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	OPN1MW3	P0DN78	364 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	GNB1	P62873	340 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	UBA52	P62987	128 aa	Known RBP	11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	ERH	P84090	104 aa	Known RBP	11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	BSX	Q3C1V8	233 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	AKIRIN2	Q53H80	203 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	OR2C3	Q8N628	320 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	OR10W1	Q8NGF6	305 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	PRSS22	Q9GZN4	317 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	ENY2	Q9NPA8	101 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	OR5AC2	Q9NZP5	309 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	FBXO7	Q9Y3I1	522 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145		U3KQ87	197 aa		11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	NSD1	Q96L73	2696 aa	Predicted RBP	11.12	□□□□□ -0.63
HIF3A-215	ENST00000533145	LINC01548	A6NM66	108 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	SMLR1	H3BR10	107 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	TRIM77	I1YAP6	450 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145		L7N2F9	121 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	SSSCA1	O60232	199 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	CRYGC	P07315	174 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	P2RY1	P47900	373 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	HOXA1	P49639	335 aa	Predicted RBP	11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	RPL23A	P62750	156 aa	Known RBP	11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	VAMP2	P63027	116 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	WT1-AS	Q06250	92 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	SPINK9	Q5DT21	86 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145		Q6ZS46	218 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	SLC35E3	Q7Z769	313 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	TTC9C	Q8N5M4	171 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	ZNF114	Q8NC26	417 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	OR11H4	Q8NGC9	324 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	DUX5	Q96PT3	197 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	HINT2	Q9BX68	163 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	HEYL	Q9NQ87	328 aa	Predicted RBP	11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	PSENEN	Q9NZ42	101 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	MBD2	Q9UBB5	411 aa		11.11	□□□□□ -0.63
HIF3A-215	ENST00000533145	FAM181B	A6NEQ2	426 aa		11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	SH2D7	A6NKC9	451 aa	Predicted RBP	11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	NPIPB5	A8MRT5	1133 aa		11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	ATP6V0E1	O15342	81 aa		11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	TCF21	O43680	179 aa		11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	TSPAN9	O75954	239 aa		11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	OR13C7	P0DN81	318 aa		11.1	□□□□□ -0.63
HIF3A-215	ENST00000533145	IAPP	P10997	89 aa		11.1	□□□□□ -0.63

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