RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
COPB1-208ENST00000532088 CLCC1Q96S66 551 aa9.86□□□□□ -0.83
COPB1-208ENST00000532088 PDCD10Q9BUL8 212 aa9.86□□□□□ -0.83
COPB1-208ENST00000532088 QTRT1Q9BXR0 403 aaKnown RBP9.86□□□□□ -0.83
COPB1-208ENST00000532088 NDUFA4L2Q9NRX3 87 aa9.86□□□□□ -0.83
COPB1-208ENST00000532088 OR51B2Q9Y5P1 312 aa9.86□□□□□ -0.83
COPB1-208ENST00000532088 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
COPB1-208ENST00000532088 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 A0A1W2PN81 502 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 ATP6V0E1O15342 81 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 SSNA1O43805 119 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 ADAP1O75689 374 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 LY86O95711 162 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 EGR2P11161 476 aaPredicted RBP9.85□□□□□ -0.83
COPB1-208ENST00000532088 CHRNA7P36544 502 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 VDAC2P45880 294 aaPredicted RBP9.85□□□□□ -0.83
COPB1-208ENST00000532088 SPCS3P61009 180 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 NDPQ00604 133 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 PRCDQ00LT1 54 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 C9orf152Q5JTZ5 239 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 Q6ZNX1 250 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 OR5M8Q8NGP6 311 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 ASB13Q8WXK3 278 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 HSPB7Q9UBY9 170 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 NSG2Q9Y328 171 aa9.85□□□□□ -0.83
COPB1-208ENST00000532088 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 SH2D7A6NKC9 451 aaPredicted RBP9.84□□□□□ -0.83
COPB1-208ENST00000532088 TEX22C9J3V5 150 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 ST8SIA3O43173 380 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 RBMXL2O75526 392 aaKnown RBP9.84□□□□□ -0.83
COPB1-208ENST00000532088 BRI3O95415 125 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 TRAPPC2P0DI81 140 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 TRAPPC2BP0DI82 140 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 GNB1P62873 340 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 CYCSP99999 105 aaKnown RBP9.84□□□□□ -0.83
COPB1-208ENST00000532088 FOXL1Q12952 345 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 C19orf54Q5BKX5 351 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 GSG1LQ6UXU4 331 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 STPG2Q8N412 459 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 UXS1Q8NBZ7 420 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 OR4D5Q8NGN0 318 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 C2orf50Q96LR7 162 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 SERTAD4Q9NUC0 356 aa9.84□□□□□ -0.83
COPB1-208ENST00000532088 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 CLPSL1A2RUU4 121 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 CGB1A6NKQ9 187 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 MED6O75586 246 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 RIPPLY3P57055 190 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 CFHR3Q02985 330 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 TNFRSF9Q07011 255 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 SRSF4Q08170 494 aaKnown RBP9.83□□□□□ -0.84
COPB1-208ENST00000532088 IZUMO4Q1ZYL8 232 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 IAH1Q2TAA2 248 aaPredicted RBP9.83□□□□□ -0.84
COPB1-208ENST00000532088 KLK9Q2XQG4 91 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
COPB1-208ENST00000532088 OR1S1Q8NH92 325 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 GRPEL2Q8TAA5 225 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 MED28Q9H204 178 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 KLK9Q9UKQ9 250 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 FBXO7Q9Y3I1 522 aa9.83□□□□□ -0.84
COPB1-208ENST00000532088 C5orf51A6NDU8 294 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 MSGN1A6NI15 193 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 LINC01548A6NM66 108 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 NPIPB5A8MRT5 1133 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 MPTX1A8MV57 137 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 E7EUB6 86 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 H3BUA1 57 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 GOSR2O14653 212 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 IFNA17P01571 189 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 CRYGCP07315 174 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 PPIFP30405 207 aaKnown RBP9.82□□□□□ -0.84
COPB1-208ENST00000532088 RRAS2P62070 204 aaPredicted RBP9.82□□□□□ -0.84
COPB1-208ENST00000532088 SLC35B1P78383 322 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 IL15RAQ13261 267 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 C10orf55Q5SWW7 151 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 COMMD1Q8N668 190 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.82□□□□□ -0.84
COPB1-208ENST00000532088 FAM110DQ8TAY7 271 aaPredicted RBP9.82□□□□□ -0.84
COPB1-208ENST00000532088 ABHD5Q8WTS1 349 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 TMEM158Q8WZ71 300 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 OR10C1Q96KK4 312 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 FYTTD1Q96QD9 318 aaKnown RBP9.82□□□□□ -0.84
COPB1-208ENST00000532088 NMES1Q9C002 83 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 PLEKHA3Q9HB20 300 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 ZFP57Q9NU63 452 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 TNCP24821 2201 aa9.82□□□□□ -0.84
COPB1-208ENST00000532088 C13orf42A0A1B0GVH6 325 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 A0A1B0GW64 132 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 CCSO14618 274 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 IGHG4P01861 327 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 MYOD1P15172 320 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 CTRB1P17538 263 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 PSMB6P28072 239 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 NKX2-1P43699 371 aaPredicted RBP9.81□□□□□ -0.84
COPB1-208ENST00000532088 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
COPB1-208ENST00000532088 PROK1P58294 105 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms