RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 BCL6BQ8N143 479 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-216ENST00000527467 SF3B6Q9Y3B4 125 aaKnown RBP6.19□□□□□ -1.42
CTNND1-216ENST00000527467 A0A0G2JMZ2 1700 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 LRRC37A2A6NM11 1700 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 A0A1W2PQF6 199 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 H3BTX0 84 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 SOCS3O14543 225 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 PAX4O43316 350 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 CCL2P13500 99 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 UNC119Q13432 240 aa6.19□□□□□ -1.42
CTNND1-216ENST00000527467 TTC3P53804 2025 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 CLDN14O95500 239 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 RPL31P62899 125 aaKnown RBP6.18□□□□□ -1.42
CTNND1-216ENST00000527467 RASL11AQ6T310 242 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 FER1L6-AS1Q8NA97 138 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 TBC1D29Q9UFV1 150 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 SMCHD1A6NHR9 2005 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 LOC105371242A0A075B767 164 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PPIAL4CA0A0B4J2A2 164 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 A0A0U1RQV5 110 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 CLPSL1A2RUU4 121 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 INS-IGF2F8WCM5 200 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 KLK8O60259 260 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 GAGE7O76087 117 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 NKX2-2O95096 273 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 INSP01308 110 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 GAGE12FP0CL80 117 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 GAGE12GP0CL81 117 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 GAGE12IP0CL82 117 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PPIAL4GP0DN37 164 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 HMGA2P52926 109 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 RHOGP84095 191 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 TGIF1Q15583 401 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PLA2G2CQ5R387 149 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 OR11H4Q8NGC9 324 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
CTNND1-216ENST00000527467 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 MS4A5Q9H3V2 200 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 TUBA4BQ9H853 241 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 TMEM74BQ9NUR3 256 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 HS3ST3B1Q9Y662 390 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 CEP290O15078 2479 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PSG1P11464 419 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 LIFP15018 202 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 LHX2P50458 406 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PIGYQ3MUY2 71 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PCSK4Q6UW60 755 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 GCSAMQ8N6F7 178 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 NPDC1Q9NQX5 325 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-216ENST00000527467 CDK5RAP2Q96SN8 1893 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 ETHE1O95571 254 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 MOSP00540 346 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 ZNF79Q15937 498 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PRSS53Q2L4Q9 553 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 CXorf66Q5JRM2 361 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-216ENST00000527467 PLPPR1Q8TBJ4 325 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 VSTM2LQ96N03 204 aa6.18□□□□□ -1.42
CTNND1-216ENST00000527467 SHISA8B8ZZ34 492 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 IGLV3-27P01718 113 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 PPBPP02775 128 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 TMEM202A6NGA9 273 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 THY1P04216 161 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 PAX1P15863 534 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 EVI2AP22794 236 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 ATP5G2Q06055 141 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 ICAM4Q14773 271 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 ZNF645Q8N7E2 425 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 FMC1Q96HJ9 113 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 CHST5Q9GZS9 411 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 GP6Q9HCN6 339 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 A0A1W2PPE3 182 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 K7ENP7 123 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 CD28P10747 220 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 ZFP36L2P47974 494 aaKnown RBP6.17□□□□□ -1.42
CTNND1-216ENST00000527467 MESP2Q0VG99 397 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 SLC25A53Q5H9E4 307 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 GFI1BQ5VTD9 330 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 INO80CQ6PI98 192 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-216ENST00000527467 CHCHD1Q96BP2 118 aaKnown RBP6.17□□□□□ -1.42
CTNND1-216ENST00000527467 SMIM8Q96KF7 97 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 ZNF385AQ96PM9 386 aaKnown RBP6.17□□□□□ -1.42
CTNND1-216ENST00000527467 PLXNA1Q9UIW2 1896 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 PATE4P0C8F1 98 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 EGR1P18146 543 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 CCL1P22362 96 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 ADMP35318 185 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 EFNB1P98172 346 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 CACNG8Q8WXS5 425 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 IFI27L1Q96BM0 104 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 SDF2L1Q9HCN8 221 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 DKK4Q9UBT3 224 aa6.17□□□□□ -1.42
CTNND1-216ENST00000527467 TPRP12270 2363 aaKnown RBP6.16□□□□□ -1.42
CTNND1-216ENST00000527467 A0A0A6YYD5 115 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 IGHV5-10-1A0A0J9YXX1 117 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 C9JAW5 83 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 CD300EQ496F6 205 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms