RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 C20orf24Q9BUV8 137 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 C8orf4Q9NR00 106 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 OR2W1Q9Y3N9 320 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 TRAV2A0A0B4J234 112 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 HRASP01112 189 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 CTSGP08311 255 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 GNAO1P09471 354 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 PLA2G7Q13093 441 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 TRPT1Q86TN4 253 aaKnown RBP11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 PACRGLQ8N7B6 248 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 MND1Q9BWT6 205 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 PLCXD1Q9NUJ7 323 aa11.65□□□□□ -0.54
CHMP4A-203ENST00000527154 FAT1Q14517 4588 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 K7EIM0 57 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 RAB27BO00194 218 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 ZNF207O43670 478 aaKnown RBP11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 C1orf134Q5TEV5 83 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 TMEM116Q8NCL8 245 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 SCARB1Q8WTV0 552 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 DGCR14Q96DF8 476 aaKnown RBP11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 RAB3CQ96E17 227 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 PLGRKTQ9HBL7 147 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 C21orf62Q9NYP8 219 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 MYCBP2O75592 4640 aa11.64□□□□□ -0.55
CHMP4A-203ENST00000527154 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 RBFOX2O43251 390 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 DENRO43583 198 aaKnown RBP11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 CD5P06127 495 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 SERPINE2P07093 398 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 C4BPBP20851 252 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 CRHBPP24387 322 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 TFPI2P48307 235 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 MRPS15P82914 257 aaKnown RBP11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 C2orf76Q3KRA6 126 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 RNF212Q495C1 297 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 MFSD4AQ8N468 514 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 FAM3DQ96BQ1 224 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 FAM210BQ96KR6 192 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 SCRT2Q9NQ03 307 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 FKBP14Q9NWM8 211 aa11.63□□□□□ -0.55
CHMP4A-203ENST00000527154 TMEM272A0A1B0GTI8 110 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 SPP1P10451 314 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 HIST1H1DP16402 221 aaKnown RBP11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 DTYMKP23919 212 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 DEFB131AP59861 70 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 TNP2Q05952 138 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 SPHARQ15513 63 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 RAB11BQ15907 218 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 TCTEX1D2Q8WW35 142 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 QTRT1Q9BXR0 403 aaKnown RBP11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 RAB22AQ9UL26 194 aa11.62□□□□□ -0.55
CHMP4A-203ENST00000527154 TRAV3A0A0B4J244 114 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 UPK2O00526 184 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 CTXN2P0C2S0 81 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 GNB3P16520 340 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 CLDN12P56749 244 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 MSMO1Q15800 293 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 LEMD1Q68G75 181 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 TMEM91Q6ZNR0 172 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 HSD17B13Q7Z5P4 300 aaPredicted RBP11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 OR10W1Q8NGF6 305 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 OR10R2Q8NGX6 335 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 TMEM203Q969S6 136 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 AIFM2Q9BRQ8 373 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 SPATA2Q9UM82 520 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 LSM2Q9Y333 95 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 AK6Q9Y3D8 172 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 F11RQ9Y624 299 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 NACAE9PAV3 2078 aa11.61□□□□□ -0.55
CHMP4A-203ENST00000527154 VPS13BQ7Z7G8 4022 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 CYB5BO43169 146 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 IFNA10P01566 189 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 NFYAP23511 347 aaPredicted RBP11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 TAS2R31P59538 309 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 PAFAH1B2P68402 229 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 ZNF773Q6PK81 442 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 CENPSQ8N2Z9 138 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 LILRB2Q8N423 598 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 GBGT1Q8N5D6 347 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 UFD1Q92890 307 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 CMTM3Q96MX0 182 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 TBC1D24Q9ULP9 559 aa11.6□□□□□ -0.55
CHMP4A-203ENST00000527154 IGKV3-7A0A075B6H7 116 aa11.59□□□□□ -0.55
CHMP4A-203ENST00000527154 TRAV14DV4A0A0A6YYC5 116 aa11.59□□□□□ -0.55
CHMP4A-203ENST00000527154 RELQ04864 619 aaPredicted RBP11.59□□□□□ -0.55
CHMP4A-203ENST00000527154 TCF24Q7RTU0 167 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms