RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 LRRTM1Q86UE6 522 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 H1FOOQ8IZA3 346 aaPredicted RBP4.9□□□□□ -1.63
SSH3-204ENST00000525913 DUSP18Q8NEJ0 188 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 OR10W1Q8NGF6 305 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 OR10J5Q8NHC4 309 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 APH1BQ8WW43 257 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 ST8SIA2Q92186 375 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 C17orf77Q96MU5 243 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 CMTM3Q96MX0 182 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 NEU1Q99519 415 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 CMSS1Q9BQ75 279 aaKnown RBP4.9□□□□□ -1.63
SSH3-204ENST00000525913 NIPSNAP3BQ9BS92 247 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 C12orf4Q9NQ89 552 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 OAZ3Q9UMX2 235 aa4.9□□□□□ -1.63
SSH3-204ENST00000525913 IGKV1D-8A0A087WSZ0 117 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 ZNF705FA8MVS1 300 aaPredicted RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 K7EQG2 157 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 DNASE2O00115 360 aaPredicted RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 DIRAS3O95661 229 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 ALPLP05186 524 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 CD5P06127 495 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 SERPINE2P07093 398 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 ZNF705DP0CH99 300 aaPredicted RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 ZNF705BP0CI00 300 aaPredicted RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 CRHBPP24387 322 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 KRTAP10-1P60331 282 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 INSL4Q14641 139 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 ZIK1Q3SY52 487 aaPredicted RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 SLC25A24Q6NUK1 477 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 MFSD4AQ8N468 514 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 SRSF8Q9BRL6 282 aaKnown RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 PGPEP1Q9NXJ5 209 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 BET1LQ9NYM9 111 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 C21orf62Q9NYP8 219 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 RBMX2Q9Y388 322 aaKnown RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 TMED3Q9Y3Q3 217 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 LINC00588Q9Y4M8 146 aa4.89□□□□□ -1.63
SSH3-204ENST00000525913 RBM7Q9Y580 266 aaKnown RBP4.89□□□□□ -1.63
SSH3-204ENST00000525913 IGHV3-66A0A0C4DH42 116 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 SAC3D1A6NKF1 404 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 J3QRK9 145 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 UPK2O00526 184 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 HLA-DQB1P01920 261 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 FCGR3AP08637 254 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 DCKP27707 260 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 TAS2R43P59537 309 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 WT1-ASQ06250 92 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 PLA2G7Q13093 441 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 SMN1Q16637 294 aaKnown RBP4.88□□□□□ -1.63
SSH3-204ENST00000525913 HSP90B2PQ58FF3 399 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 FAM222AQ5U5X8 452 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 TMPRSS11AQ6ZMR5 421 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 KCTD9Q7L273 389 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 GDPD1Q8N9F7 314 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 C15orf53Q8NAA6 179 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 DCANP1Q8TF63 244 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 MAFIPQ8WZ33 124 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 GRAMD2BQ96HH9 432 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 Q96MT0 163 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 RAB40CQ96S21 281 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 GPHA2Q96T91 129 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 NXF2Q9GZY0 626 aaKnown RBP4.88□□□□□ -1.63
SSH3-204ENST00000525913 XCL2Q9UBD3 114 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 PRELID3BQ9Y3B1 194 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 AP4S1Q9Y587 144 aa4.88□□□□□ -1.63
SSH3-204ENST00000525913 LRP2P98164 4655 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 IGKV1D-13A0A0B4J2D9 117 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 TMEM189A5PLL7 270 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 SMIM9A6NGZ8 99 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 ST8SIA3O43173 380 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 WBP4O75554 376 aaKnown RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 BPNT1O95861 308 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 CD1AP06126 327 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 OR13C7P0DN81 318 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 IGKV1-13P0DP09 117 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 HTN3P15516 51 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 EMP1P54849 157 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 RELQ04864 619 aaPredicted RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 SSX1Q16384 188 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 POU2AF1Q16633 256 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 TIMM50Q3ZCQ8 353 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 Q56UQ5 140 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 ACTL10Q5JWF8 245 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 TTC23Q5W5X9 447 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 ZNF773Q6PK81 442 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 TOMM20LQ6UXN7 152 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 UBAC2Q8NBM4 344 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 OR4S2Q8NH73 311 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 CENPNQ96H22 339 aaPredicted RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 GFI1Q99684 422 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 ATG101Q9BSB4 218 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 URM1Q9BTM9 101 aaKnown RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 Q9H8V8 135 aa4.87□□□□□ -1.63
SSH3-204ENST00000525913 MRPS7Q9Y2R9 242 aaKnown RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 F11RQ9Y624 299 aaKnown RBP4.87□□□□□ -1.63
SSH3-204ENST00000525913 TNXBP22105 4242 aa4.86□□□□□ -1.63
SSH3-204ENST00000525913 TEX50A0A1B0GTY4 177 aa4.86□□□□□ -1.63
SSH3-204ENST00000525913 PNMA8CA0A1B0GUJ8 204 aa4.86□□□□□ -1.63
SSH3-204ENST00000525913 FAM229AH3BQW9 127 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms