RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TAS2R43P59537 309 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 GDPD1Q8N9F7 314 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 SCARB1Q8WTV0 552 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 CENPOQ9BU64 300 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 BET1LQ9NYM9 111 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 FCGR3AP08637 254 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 CD37P11049 281 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 MYL12AP19105 171 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 MRPS15P82914 257 aaKnown RBP12.37□□□□□ -0.43
PVT1-220ENST00000524165 SLC25A24Q6NUK1 477 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 ZNF485Q8NCK3 441 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 ZNRF2Q8NHG8 242 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 APH1BQ8WW43 257 aa12.37□□□□□ -0.43
PVT1-220ENST00000524165 RBMX2Q9Y388 322 aaKnown RBP12.37□□□□□ -0.43
PVT1-220ENST00000524165 IGHV3OR16-13A0A075B7E8 117 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 IGHV3-74A0A0B4J1X5 117 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 SLC22A5O76082 557 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 CD1AP06126 327 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 Q56UQ5 140 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 HSD17B10Q99714 261 aaKnown RBP12.36□□□□□ -0.43
PVT1-220ENST00000524165 ATG101Q9BSB4 218 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 CLEC2DQ9UHP7 191 aa12.36□□□□□ -0.43
PVT1-220ENST00000524165 DIMT1Q9UNQ2 313 aaKnown RBP12.36□□□□□ -0.43
PVT1-220ENST00000524165 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 IRGMA1A4Y4 181 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 EI24O14681 340 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 YIF1AO95070 293 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 EIF4EP06730 217 aaKnown RBP12.35□□□□□ -0.43
PVT1-220ENST00000524165 SERPINE2P07093 398 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 BTF3P20290 206 aaKnown RBP12.35□□□□□ -0.43
PVT1-220ENST00000524165 XGP55808 180 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 PHYHIPQ92561 330 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 NEU1Q99519 415 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 C1QTNF4Q9BXJ3 329 aa12.35□□□□□ -0.43
PVT1-220ENST00000524165 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 KNCNA6PVL3 124 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 IGLV2-14P01704 120 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 OXA1LQ15070 435 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
PVT1-220ENST00000524165 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 HSD17B13Q7Z5P4 300 aaPredicted RBP12.34□□□□□ -0.43
PVT1-220ENST00000524165 OR56B1Q8NGI3 324 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 TCTEX1D2Q8WW35 142 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 ST8SIA2Q92186 375 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 NIPSNAP3BQ9BS92 247 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 QTRT1Q9BXR0 403 aaKnown RBP12.34□□□□□ -0.43
PVT1-220ENST00000524165 COMMD5Q9GZQ3 224 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 HRASLSQ9HDD0 168 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 HMCN2Q8NDA2 5059 aa12.34□□□□□ -0.43
PVT1-220ENST00000524165 K7EIM0 57 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 FGF2P09038 288 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
PVT1-220ENST00000524165 EIF4EBP1Q13541 118 aaPredicted RBP12.33□□□□□ -0.44
PVT1-220ENST00000524165 SMN1Q16637 294 aaKnown RBP12.33□□□□□ -0.44
PVT1-220ENST00000524165 LILRB2Q8N423 598 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 OR10W1Q8NGF6 305 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 RABAC1Q9UI14 185 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 KCNK7Q9Y2U2 307 aa12.33□□□□□ -0.44
PVT1-220ENST00000524165 HLA-DQB1P01920 261 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 OR13C7P0DN81 318 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 WT1-ASQ06250 92 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 P2RY14Q15391 338 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 RBM48Q5RL73 367 aaKnown RBP12.32□□□□□ -0.44
PVT1-220ENST00000524165 ZNF773Q6PK81 442 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 Q6ZS49 121 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 MAFIPQ8WZ33 124 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 DKK2Q9UBU2 259 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 OR2W1Q9Y3N9 320 aa12.32□□□□□ -0.44
PVT1-220ENST00000524165 F11RQ9Y624 299 aaKnown RBP12.32□□□□□ -0.44
PVT1-220ENST00000524165 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 J3QRK9 145 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 K7EQG2 157 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
PVT1-220ENST00000524165 HTN3P15516 51 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 GNB3P16520 340 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 EMP1P54849 157 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
PVT1-220ENST00000524165 GNGT1P63211 74 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 SERTAD4-AS1Q5TG53 156 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 ZNF705AQ6ZN79 300 aaPredicted RBP12.31□□□□□ -0.44
PVT1-220ENST00000524165 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 NXF2Q9GZY0 626 aaKnown RBP12.31□□□□□ -0.44
PVT1-220ENST00000524165 SPATA2Q9UM82 520 aa12.31□□□□□ -0.44
PVT1-220ENST00000524165 UPK2O00526 184 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms