RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 DUSP18Q8NEJ0 188 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 SRSF8Q9BRL6 282 aaKnown RBP9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 NIPSNAP3BQ9BS92 247 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 VSIRQ9H7M9 311 aa9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 ARGLU1Q9NWB6 273 aaPredicted RBP9.75□□□□□ -0.85
NKX3-1-202ENST00000523261 TMEM189A5PLL7 270 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 CYB5BO43169 146 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 ST8SIA3O43173 380 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 YIF1AO95070 293 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 GYS2P54840 703 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 OXA1LQ15070 435 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 ZIK1Q3SY52 487 aaPredicted RBP9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 Q56UQ5 140 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 ACTL10Q5JWF8 245 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 SLC25A24Q6NUK1 477 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 MFSD4AQ8N468 514 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 GRAMD2BQ96HH9 432 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 NEU1Q99519 415 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 GINS4Q9BRT9 223 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 URM1Q9BTM9 101 aaKnown RBP9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 BET1LQ9NYM9 111 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 RABAC1Q9UI14 185 aa9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 RBMX2Q9Y388 322 aaKnown RBP9.74□□□□□ -0.85
NKX3-1-202ENST00000523261 SAC3D1A6NKF1 404 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 K7EIM0 57 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 K7EQG2 157 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 BPNT1O95861 308 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 IGLV2-14P01704 120 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 APOHP02749 345 aaPredicted RBP9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 ALPLP05186 524 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 CDK1P06493 297 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 FCGR3AP08637 254 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 DCKP27707 260 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 TAS2R43P59537 309 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 SSX1Q16384 188 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 TIMM50Q3ZCQ8 353 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 PLAC9Q5JTB6 97 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 Q6ZSN1 163 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 XCL2Q9UBD3 114 aa9.73□□□□□ -0.85
NKX3-1-202ENST00000523261 PNMA8CA0A1B0GUJ8 204 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 HRASP01112 189 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 EIF4EP06730 217 aaKnown RBP9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 SERPINE2P07093 398 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 FUSP35637 526 aaKnown RBP eCLIP9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 WT1-ASQ06250 92 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 LRRTM1Q86UE6 522 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 ZNF485Q8NCK3 441 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 TCTEX1D2Q8WW35 142 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 MAFIPQ8WZ33 124 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 C1QTNF4Q9BXJ3 329 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 PTTG2Q9NZH5 202 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 CLEC2DQ9UHP7 191 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 AP4S1Q9Y587 144 aa9.72□□□□□ -0.85
NKX3-1-202ENST00000523261 TRAV3A0A0B4J244 114 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 IGHV3-66A0A0C4DH42 116 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 ZNF705FA8MVS1 300 aaPredicted RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 J3QRK9 145 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 ZNF705DP0CH99 300 aaPredicted RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 ZNF705BP0CI00 300 aaPredicted RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 OR13C7P0DN81 318 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 CD37P11049 281 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 CD36P16671 472 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 EIF4EBP1Q13541 118 aaPredicted RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 APH1BQ8WW43 257 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 CENPNQ96H22 339 aaPredicted RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 QTRT1Q9BXR0 403 aaKnown RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 HRASLSQ9HDD0 168 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 KCNK7Q9Y2U2 307 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 ORC6Q9Y5N6 252 aa9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.86
NKX3-1-202ENST00000523261 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 FCGR1AP12314 374 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 MAPK3P27361 379 aaPredicted RBP9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 FGF9P31371 208 aaPredicted RBP9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 ZNF773Q6PK81 442 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 HSD17B10Q99714 261 aaKnown RBP9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 GINS3Q9BRX5 216 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 COMMD5Q9GZQ3 224 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 NXF2Q9GZY0 626 aaKnown RBP9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 LINC00588Q9Y4M8 146 aa9.7□□□□□ -0.86
NKX3-1-202ENST00000523261 UPK2O00526 184 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 GNB3P16520 340 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 DLK1P80370 383 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 MRPS15P82914 257 aaKnown RBP9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 INSL4Q14641 139 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 SMN1Q16637 294 aaKnown RBP9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms