RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 FAM157CP0CG43 387 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 PVALBP20472 110 aaPredicted RBP6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 IL3RAP26951 378 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 RAB13P51153 203 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 CAV2P51636 162 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 LOXL1Q08397 574 aaPredicted RBP6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 POU2AF1Q16633 256 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 FAM74A3Q4VXF1 159 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 Q5PR19 223 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 FAM74A1Q5RGS3 127 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 TPTE2P1Q5T6R2 138 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 TGIF2LXQ8IUE1 241 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 VKORC1L1Q8N0U8 176 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 FAM71E2Q8N5Q1 922 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 DMBX1Q8NFW5 382 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 OR4S2Q8NH73 311 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 DCUN1D4Q92564 292 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 R3HDM4Q96D70 268 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 RRNAD1Q96FB5 475 aaKnown RBP6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 RITA1Q96K30 269 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 SMIM8Q96KF7 97 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 SPIN2AQ99865 258 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 SPIN2BQ9BPZ2 258 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 PCGF1Q9BSM1 259 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 CYTL1Q9NRR1 136 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 SLC35D1Q9NTN3 355 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 ZFP57Q9NU63 452 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 UQCC1Q9NVA1 299 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 COA4Q9NYJ1 87 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 OR5AC2Q9NZP5 309 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 AMMECR1Q9Y4X0 333 aaPredicted RBP6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 CCDC168Q8NDH2 2452 aa6.31□□□□□ -1.4
CTHRC1-203ENST00000520337 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 ITPR3Q14573 2671 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 IGHV1-3A0A0C4DH29 117 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 A0A1W2PPI3 338 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 MARCH11A6NNE9 402 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 B4DSR2 109 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 ST8SIA3O43173 380 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 KCNAB3O43448 404 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 DEDDO75618 318 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 GAPDHP04406 335 aaKnown RBP6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 OR9G9P0C7N8 305 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 NQO2P16083 231 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 HTR1DP28221 377 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 NKX2-1P43699 371 aaPredicted RBP6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 UBE2E1P51965 193 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 AKR1C2P52895 323 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 B2MP61769 119 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 RTL8BQ17RB0 113 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 RNF212Q495C1 297 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 AARDQ4LEZ3 155 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 LHFPL4Q7Z7J7 247 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 DYNAPQ8N1N2 210 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 LHX4Q969G2 390 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 SAV1Q9H4B6 383 aaPredicted RBP6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 TUBA4BQ9H853 241 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 DPM3Q9P2X0 92 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 RCL1Q9Y2P8 373 aaKnown RBP6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 WASHC3Q9Y3C0 194 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 HECTD1Q9ULT8 2610 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 ZANQ9Y493 2812 aa6.3□□□□□ -1.4
CTHRC1-203ENST00000520337 CREBBPQ92793 2442 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 TRAV3A0A0B4J244 114 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 CENPVL3A0A0U1RRI6 287 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 A0A1W2PRD5 423 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 A0A1W2PRF3 423 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 A0A1W2PRM7 423 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 JTBO76095 146 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 NXPH3O95157 252 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 TMEM50AO95807 157 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 IGLV2-23P01705 113 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 APOA2P02652 100 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 S100A8P05109 93 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 MC5RP33032 325 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 SULT1A2P50226 295 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 ARHGDIBP52566 201 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 PAX9P55771 341 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 S100A10P60903 97 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 RAB5BP61020 215 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 HABP2Q14520 560 aaPredicted RBP6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 MINOS1Q5TGZ0 78 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 OR4A47Q6IF82 309 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 SSX9Q7RTT3 188 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 PDPNQ86YL7 162 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 FOXRED2Q8IWF2 684 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 C15orf54Q8N8G6 183 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 MAPK1IP1LQ8NDC0 245 aa6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 RNASE11Q8TAA1 199 aaKnown RBP6.29□□□□□ -1.4
CTHRC1-203ENST00000520337 RPEQ96AT9 228 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms