RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 MSGN1A6NI15 193 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 MPTX1A8MV57 137 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 CYB5BO43169 146 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 PITX3O75364 302 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 LY86O95711 162 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 OPN1MWP04001 364 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 OPN1MW2P0DN77 364 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 OPN1MW3P0DN78 364 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 HKR1P10072 659 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 NKX2-1P43699 371 aaPredicted RBP11.15□□□□□ -0.62
SDC2-203ENST00000519587 SLC35B1P78383 322 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
SDC2-203ENST00000519587 AKIRIN2Q53H80 203 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 UNQ5815/PRO19632Q6UWF5 114 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 STPG2Q8N412 459 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 ASB13Q8WXK3 278 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 OR10C1Q96KK4 312 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 NDUFA4L2Q9NRX3 87 aa11.15□□□□□ -0.62
SDC2-203ENST00000519587 WIPF1O43516 503 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 SCGB1D2O95969 90 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 SRSF2Q01130 221 aaKnown RBP11.14□□□□□ -0.63
SDC2-203ENST00000519587 FCN2Q15485 313 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 TMEM95Q3KNT9 176 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 Q6ZS46 218 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.14□□□□□ -0.63
SDC2-203ENST00000519587 OR4D5Q8NGN0 318 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
SDC2-203ENST00000519587 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
SDC2-203ENST00000519587 NMES1Q9C002 83 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 HIPK2Q9H2X6 1198 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 FBXO7Q9Y3I1 522 aa11.14□□□□□ -0.63
SDC2-203ENST00000519587 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 HAX1O00165 279 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 NXPH3O95157 252 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 PET100P0DJ07 73 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 MYOD1P15172 320 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 ERHP84090 104 aaKnown RBP11.13□□□□□ -0.63
SDC2-203ENST00000519587 FOXL1Q12952 345 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 C2orf68Q2NKX9 166 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
SDC2-203ENST00000519587 SERTAD4Q9NUC0 356 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 WSB1Q9Y6I7 421 aa11.13□□□□□ -0.63
SDC2-203ENST00000519587 CLPSL1A2RUU4 121 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 PSMB11A5LHX3 300 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 NPIPB5A8MRT5 1133 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 SYNGR2O43760 224 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 SIX6O95475 246 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 GIPP09681 153 aaPredicted RBP11.12□□□□□ -0.63
SDC2-203ENST00000519587 OR13C7P0DN81 318 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 PVALBP20472 110 aaPredicted RBP11.12□□□□□ -0.63
SDC2-203ENST00000519587 SNCAP37840 140 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 H2BFSP57053 126 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 S100A10P60903 97 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 SPINK9Q5DT21 86 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 CXorf66Q5JRM2 361 aaPredicted RBP11.12□□□□□ -0.63
SDC2-203ENST00000519587 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
SDC2-203ENST00000519587 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 LINC01006Q8NI28 216 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
SDC2-203ENST00000519587 NOL4LQ96MY1 436 aaPredicted RBP11.12□□□□□ -0.63
SDC2-203ENST00000519587 RBKSQ9H477 322 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 RNF114Q9Y508 228 aa11.12□□□□□ -0.63
SDC2-203ENST00000519587 hCG_2014768A0A024R1R8 64 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 A0A1B0GW64 132 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 HMX3A6NHT5 357 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 CGB1A6NKQ9 187 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 G3V318 75 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 H3BUA1 57 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 APELAP0DMC3 54 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
SDC2-203ENST00000519587 DEFA4P12838 97 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 AREGP15514 252 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 CXCL3P19876 107 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 PSMB6P28072 239 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
SDC2-203ENST00000519587 RAP2BP61225 183 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
SDC2-203ENST00000519587 ID3Q02535 119 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 KLHDC1Q8N7A1 406 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 RAB40CQ96S21 281 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 ZNF436Q9C0F3 470 aaPredicted RBP11.11□□□□□ -0.63
SDC2-203ENST00000519587 LINC00527Q9UJ94 153 aa11.11□□□□□ -0.63
SDC2-203ENST00000519587 ANK2Q01484 3957 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 TMEM89A2RUT3 159 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 E7EUB6 86 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 L7N2F9 121 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 SSSCA1O60232 199 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 MBPP02686 304 aaPredicted RBP11.1□□□□□ -0.63
SDC2-203ENST00000519587 RLN2P04090 185 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms