RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 OR10G7Q8NGN6 311 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 NPVFQ9HCQ7 196 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 MAP1LC3B2A6NCE7 125 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 SNAPINO95295 136 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 IGKV1D-33P01593 117 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 IGKV1-33P01594 117 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
PCM1-206ENST00000518537 KLRD1Q13241 179 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
PCM1-206ENST00000518537 C2orf83Q53S99 150 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 TPTE2P1Q5T6R2 138 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
PCM1-206ENST00000518537 MAP1LC3BQ9GZQ8 125 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
PCM1-206ENST00000518537 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
PCM1-206ENST00000518537 C1orf122Q6ZSJ8 110 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 KIR3DL3Q8N743 410 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 CLDND2Q8NHS1 167 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 ACTR3CQ9C0K3 210 aaPredicted RBP13.38□□□□□ -0.27
PCM1-206ENST00000518537 TPSG1Q9NRR2 321 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 DPM3Q9P2X0 92 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 RNF224P0DH78 156 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 RNASE2P10153 161 aaKnown RBP13.38□□□□□ -0.27
PCM1-206ENST00000518537 CEACAM3P40198 252 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 ARSJQ5FYB0 599 aaPredicted RBP13.38□□□□□ -0.27
PCM1-206ENST00000518537 ZNF506Q5JVG8 444 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 FAM122CQ6P4D5 195 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
PCM1-206ENST00000518537 CTXND1A0A1B0GTU2 59 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 SOX15O60248 233 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 PDLIM4P50479 330 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 LCN2P80188 198 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 PSG5Q15238 335 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 C10orf55Q5SWW7 151 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 CCL19Q99731 98 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 MGST2Q99735 147 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 BPESC1Q9GZL8 116 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 SLC25A22Q9H936 323 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 KLF2Q9Y5W3 355 aaPredicted RBP13.37□□□□□ -0.27
PCM1-206ENST00000518537 ACACBO00763 2458 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 A0A1W2PPI3 338 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 E7EUB6 86 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 FNDC10F2Z333 226 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 INS-IGF2F8WCM5 200 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 CYB5BO43169 146 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 IGHV4-39P01824 125 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 OR13C7P0DN81 318 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 CNTFRP26992 372 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 OPRK1P41145 380 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 ICAM4Q14773 271 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 BSXQ3C1V8 233 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 HCP5Q6MZN7 132 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 TEPPQ6URK8 271 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 VMO1Q7Z5L0 202 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 MMD2Q8IY49 270 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
PCM1-206ENST00000518537 EIF3GO75821 320 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCM1-206ENST00000518537 LDLRAD2Q5SZI1 272 aa13.36□□□□□ -0.27
PCM1-206ENST00000518537 SPOCK3Q9BQ16 436 aa13.36□□□□□ -0.27
PCM1-206ENST00000518537 GGTLC1Q9BX51 225 aa13.36□□□□□ -0.27
PCM1-206ENST00000518537 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
PCM1-206ENST00000518537 HILPDAQ9Y5L2 63 aa13.36□□□□□ -0.27
PCM1-206ENST00000518537 LOC102723971A0A1B0GUV8 181 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 A0A1W2PRD5 423 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 A0A1W2PRF3 423 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 A0A1W2PRM7 423 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 CGB1A6NKQ9 187 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 ZFP92A6NM28 416 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 ODF3BA8MYP8 253 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 TIMM23O14925 209 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 ACTL6BO94805 426 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 CRYGBP07316 175 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 NPBWR1P48145 328 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 RAB31Q13636 194 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 PRSS8Q16651 343 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 KHDC3LQ587J8 217 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 ZNF843Q8N446 348 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 IGSF10Q6WRI0 2623 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 IFNA1P01562 189 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCM1-206ENST00000518537 LMO4P61968 165 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 TNXAQ16473 311 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 IGFBPL1Q8WX77 278 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 RNF5Q99942 180 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 METTL1Q9UBP6 276 aaKnown RBP13.35□□□□□ -0.27
PCM1-206ENST00000518537 SIGLEC9Q9Y336 463 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 LSM4Q9Y4Z0 139 aaKnown RBP13.35□□□□□ -0.27
PCM1-206ENST00000518537 PXMP4Q9Y6I8 212 aa13.35□□□□□ -0.27
PCM1-206ENST00000518537 IGHV2-70DA0A0C4DH43 119 aa13.34□□□□□ -0.27
PCM1-206ENST00000518537 DNASE2O00115 360 aaPredicted RBP13.34□□□□□ -0.27
PCM1-206ENST00000518537 HMGB3O15347 200 aaKnown RBP13.34□□□□□ -0.27
PCM1-206ENST00000518537 NUPL2O15504 423 aaKnown RBP13.34□□□□□ -0.27
PCM1-206ENST00000518537 HSPB1P04792 205 aaKnown RBP13.34□□□□□ -0.27
PCM1-206ENST00000518537 SRP19P09132 144 aaKnown RBP13.34□□□□□ -0.27
PCM1-206ENST00000518537 MIC13Q5XKP0 118 aa13.34□□□□□ -0.27
PCM1-206ENST00000518537 LHFPL4Q7Z7J7 247 aa13.34□□□□□ -0.27
PCM1-206ENST00000518537 MRPL41Q8IXM3 137 aaKnown RBP13.34□□□□□ -0.27
PCM1-206ENST00000518537 CLRN3Q8NCR9 226 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms