RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 OR51I2Q9H344 312 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 XAGE1AQ9HD64 81 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 OR5AC2Q9NZP5 309 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 C3orf18Q9UK00 162 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 DKKL1Q9UK85 242 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 PRELID1Q9Y255 219 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 TONSLQ96HA7 1378 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 KIF15Q9NS87 1388 aa0.68□□□□□ -2.3
TRAPPC11-210ENST00000513600 HEATR5AQ86XA9 2040 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 CPAMD8Q8IZJ3 1885 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 IGHV1-69-2A0A0G2JMI3 117 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 C21orf140B9A014 251 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 ACOX3O15254 700 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 NIPSNAP2O75323 286 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 DCTN3O75935 186 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 PMP2P02689 132 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 ISG15P05161 165 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 CLVS2Q5SYC1 327 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 C1orf194Q5T5A4 169 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 CD200R1LQ6Q8B3 271 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 C5orf46Q6UWT4 87 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 ZNF550Q7Z398 422 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 COMMD7Q86VX2 200 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 C10orf67Q8IYJ2 551 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 OR2T27Q8NH04 317 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 YIPF3Q9GZM5 350 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 CXorf21Q9HAI6 301 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 PARVGQ9HBI0 331 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 FKBP14Q9NWM8 211 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 AK3Q9UIJ7 227 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 KIF24Q5T7B8 1368 aa0.67□□□□□ -2.3
TRAPPC11-210ENST00000513600 TRBV10-2A0A0K0K1G8 114 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 OR4C45A6NMZ5 311 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 LEPROTO15243 131 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 SLC22A1O15245 554 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 AHSA1O95433 338 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 REG1AP05451 166 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 UCHL3P15374 230 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 CCL1P22362 96 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 RPS12P25398 132 aaKnown RBP0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 CSN1S1P47710 185 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 MARCKSL1P49006 195 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 RAB13P51153 203 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 AP2S1P53680 142 aaPredicted RBP0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 RAB5BP61020 215 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 NAA20P61599 178 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 POLR2GP62487 172 aaKnown RBP eCLIP0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 UBE2IP63279 158 aaKnown RBP0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 TNFAIP6P98066 277 aaPredicted RBP0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 RSU1Q15404 277 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 C1orf195Q5TG92 126 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 LPCAT4Q643R3 524 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 HIST2H3AQ71DI3 136 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 GPR32P1Q8NGA4 272 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 SGMS2Q8NHU3 365 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 PTH2Q96A98 100 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 OPTNQ96CV9 577 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 GPR84Q9NQS5 396 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 RSL24D1Q9UHA3 163 aaKnown RBP0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 ANAPC10Q9UM13 185 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 PXMP4Q9Y6I8 212 aa0.66□□□□□ -2.3
TRAPPC11-210ENST00000513600 TRBV6-7A0A0A0MS04 114 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 EVPLLA8MZ36 301 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 LST1O00453 97 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 TGOLN2O43493 480 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 IFNA5P01569 189 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR5G3P0C626 314 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 SULT1A3P0DMM9 295 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 SULT1A4P0DMN0 295 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 RUNX1Q01196 453 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 CAV1Q03135 178 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 FABP9Q0Z7S8 132 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 HIST3H3Q16695 136 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 TNFAIP8L3Q5GJ75 292 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 COQ5Q5HYK3 327 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 PTRHD1Q6GMV3 140 aaKnown RBP0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 SFXN4Q6P4A7 337 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 SSX8Q7RTT4 187 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 DEFB125Q8N687 156 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 AQP3Q92482 292 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 ROPN1LQ96C74 230 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 DIRAS2Q96HU8 199 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 MRPS26Q9BYN8 205 aaKnown RBP0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 BAIAP2Q9UQB8 552 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 COQ4Q9Y3A0 265 aa0.65□□□□□ -2.31
TRAPPC11-210ENST00000513600 ALPK2Q86TB3 2170 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 DCCP43146 1447 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 SIPA1L1O43166 1804 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 A0A1B0GV50 99 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 IRGMA1A4Y4 181 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 SMIM23A6NLE4 172 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 M0R036 132 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 KCNK1O00180 336 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 CALB1P05937 261 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 FAM228BP0C875 321 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 KCNE1P15382 129 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 S100A7P31151 101 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 NKX2-5P52952 324 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms