RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PRH1P02810 166 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 FAM106CPP0CH98 169 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 NPY1RP25929 384 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 MAS1LP35410 378 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 SUB1P53999 127 aaKnown RBP eCLIP6.51□□□□□ -1.37
HTT-209ENST00000512068 ATP5IP56385 69 aaPredicted RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 GNB1P62873 340 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 PRCDQ00LT1 54 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 PAX2Q02962 417 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 MMDQ15546 238 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 AARDQ4LEZ3 155 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 CLLU1Q5K131 121 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 LHFPL4Q7Z7J7 247 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 HSD17B11Q8NBQ5 300 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 SLC24A4Q8NFF2 622 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 GNPNAT1Q96EK6 184 aaPredicted RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 TBX15Q96SF7 602 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 TMEM147Q9BVK8 224 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 C1RLQ9NZP8 487 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
HTT-209ENST00000512068 LRRK2Q5S007 2527 aa6.51□□□□□ -1.37
HTT-209ENST00000512068 UBR5O95071 2799 aaPredicted RBP6.5□□□□□ -1.37
HTT-209ENST00000512068 UBE2L5PA0A1B0GUS4 154 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 SMCO3A2RU48 225 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 SRRM4A7MD48 611 aaKnown RBP6.5□□□□□ -1.37
HTT-209ENST00000512068 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 C17orf112F2Z3M2 114 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 NBR2O15453 112 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 VENTXO95231 258 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 TMEM50AO95807 157 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 OPN1MWP04001 364 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 OPN1MW2P0DN77 364 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 OPN1MW3P0DN78 364 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 TMEM11P17152 192 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 SAA4P35542 130 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 RPL27AP46776 148 aaKnown RBP6.5□□□□□ -1.37
HTT-209ENST00000512068 PAX9P55771 341 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 PAX8Q06710 450 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 PSG5Q15238 335 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 TNXAQ16473 311 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 AKR1C8PQ5T2L2 129 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 HCP5Q6MZN7 132 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 TMEM14EPQ6UXP3 125 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 ETV3LQ6ZN32 361 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 STPG2Q8N412 459 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 ZNF709Q8N972 641 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 TMED6Q8WW62 240 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 GINS3Q9BRX5 216 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 CYTL1Q9NRR1 136 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 UQCC1Q9NVA1 299 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 HIF1ANQ9NWT6 349 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 FAM96BQ9Y3D0 163 aa6.5□□□□□ -1.37
HTT-209ENST00000512068 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
HTT-209ENST00000512068 FLNCQ14315 2725 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 LRBAP50851 2863 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 IGHV1-69DA0A0B4J2H0 117 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 TEX50A0A1B0GTY4 177 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 NCBP2LA6PVI3 153 aaKnown RBP6.49□□□□□ -1.37
HTT-209ENST00000512068 ZNF705EA8MWA4 302 aaPredicted RBP6.49□□□□□ -1.37
HTT-209ENST00000512068 J3QLI3 93 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 RRHO14718 337 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 ATP6V1G1O75348 118 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 TSPAN9O75954 239 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 CNIH1O95406 144 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 IGLV2-23P01705 113 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 IGHV1-69P01742 117 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 SNRNP70P08621 437 aaKnown RBP6.49□□□□□ -1.37
HTT-209ENST00000512068 SEC11BP0C7V7 166 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 FGF7P21781 194 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 RAB5CP51148 216 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 RAB2AP61019 212 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 BLOC1S1P78537 153 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 LOXL1Q08397 574 aaPredicted RBP6.49□□□□□ -1.37
HTT-209ENST00000512068 HNF4GQ14541 408 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 FAM74A1Q5RGS3 127 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 XP32Q5T750 250 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 PRSS57Q6UWY2 283 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 PPP1R27Q86WC6 154 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 OR2G3Q8NGZ4 309 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 ABHD5Q8WTS1 349 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 BSCL2Q96G97 398 aaPredicted RBP6.49□□□□□ -1.37
HTT-209ENST00000512068 Q96MF0 132 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 OR4C12Q96R67 309 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 REG4Q9BYZ8 158 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 FBXL15Q9H469 300 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 ZNF430Q9H8G1 570 aaPredicted RBP6.49□□□□□ -1.37
HTT-209ENST00000512068 SIGLEC9Q9Y336 463 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 SPG11Q96JI7 2443 aa6.49□□□□□ -1.37
HTT-209ENST00000512068 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
HTT-209ENST00000512068 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
HTT-209ENST00000512068 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
HTT-209ENST00000512068 CYB5BO43169 146 aa6.48□□□□□ -1.37
HTT-209ENST00000512068 TGFAP01135 160 aa6.48□□□□□ -1.37
HTT-209ENST00000512068 IL6RP08887 468 aaPredicted RBP6.48□□□□□ -1.37
HTT-209ENST00000512068 VDAC2P45880 294 aaPredicted RBP6.48□□□□□ -1.37
HTT-209ENST00000512068 CAMLGP49069 296 aa6.48□□□□□ -1.37
HTT-209ENST00000512068 DLK1P80370 383 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms