RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 ANGPTL5Q86XS5 388 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 EXOC3-AS1Q8N2X6 119 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 DAND5Q8N907 189 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 OR4D11Q8NGI4 311 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 OR13C4Q8NGS5 318 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 THEM6Q8WUY1 208 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 CCDC115Q96NT0 180 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 LINC00574Q9H8X3 128 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 RNF122Q9H9V4 155 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 EFCAB1Q9HAE3 211 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 LINC00588Q9Y4M8 146 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 CEP152O94986 1710 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 FMN1Q68DA7 1419 aa2.32□□□□□ -2.04
CAST-229ENST00000510098 NEO1Q92859 1461 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 ARAP1Q96P48 1450 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 NID2Q14112 1375 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 TRIP11Q15643 1979 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 SVILO95425 2214 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 ZCCHC11Q5TAX3 1644 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 BORCS7-ASMTA0A0B4J1R7 106 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 TRAV38-1A0A0B4J264 116 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 DUXBA0A1W2PPF3 345 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 BET1O15155 118 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 NDUFA2O43678 99 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 SLC25A20O43772 301 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 SH2D1AO60880 128 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 NDUFB2O95178 105 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 WISP3O95389 354 aaPredicted RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 TRGV3P03979 118 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 CISD3P0C7P0 127 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 LINC00869P0C866 280 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 GPX2P18283 190 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BOP23527 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 CRYBB3P26998 211 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BBP33778 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 RPL27AP46776 148 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 GABRA2P47869 451 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BDP58876 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 TSPEAR-AS2P59090 65 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BCP62807 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 RPL30P62888 115 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 CCL20P78556 96 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST2H2BEQ16778 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 LINC00483Q53H64 154 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 C10orf91Q5T1B1 145 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 RPL22L1Q6P5R6 122 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 SSX8Q7RTT4 187 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 C3orf22Q8N5N4 141 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 TMEM105Q8N8V8 129 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 OR10D4PQ8NGN7 298 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 RNASE11Q8TAA1 199 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 UBALD1Q8TB05 177 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BHQ93079 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 ADAT3Q96EY9 351 aaPredicted RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 PFDN5Q99471 154 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BNQ99877 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 HIST1H2BMQ99879 126 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 DOHHQ9BU89 302 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 TMEM126AQ9H061 195 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 PAIP2BQ9ULR5 123 aaKnown RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 SNX12Q9UMY4 172 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 AMMECR1Q9Y4X0 333 aaPredicted RBP2.31□□□□□ -2.04
CAST-229ENST00000510098 NUBP2Q9Y5Y2 271 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 PCM1Q15154 2024 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 UHRF1BP1Q6BDS2 1440 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 ANKRD12Q6UB98 2062 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 PTPRJQ12913 1337 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 IGSF9BQ9UPX0 1349 aa2.31□□□□□ -2.04
CAST-229ENST00000510098 MYH3P11055 1940 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 DICER1Q9UPY3 1922 aaKnown RBP2.3□□□□□ -2.04
CAST-229ENST00000510098 NUP214P35658 2090 aaPredicted RBP2.3□□□□□ -2.04
CAST-229ENST00000510098 DOCK9Q9BZ29 2069 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 A0A087WUU8 490 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 DHRS12A0PJE2 317 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 H3BMM0 161 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 J3KT08 172 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 PRM2P04554 102 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 DBIP07108 87 aaKnown RBP2.3□□□□□ -2.04
CAST-229ENST00000510098 BPGMP07738 259 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 CASP1P29466 404 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 BLVRBP30043 206 aaPredicted RBP2.3□□□□□ -2.04
CAST-229ENST00000510098 CSN1S1P47710 185 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 TAS2R20P59543 309 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 CKS1BP61024 79 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 RPS11P62280 158 aaKnown RBP eCLIP2.3□□□□□ -2.04
CAST-229ENST00000510098 LGALS9BQ3B8N2 356 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 LGALS9CQ6DKI2 356 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 AGTRAPQ6RW13 159 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 C16orf47Q6ZP98 133 aaPredicted RBP2.3□□□□□ -2.04
CAST-229ENST00000510098 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 CROCCP2Q86T23 111 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 ZNF695Q8IW36 515 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 TMEM86AQ8N2M4 240 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 PACRGLQ8N7B6 248 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 ZNF709Q8N972 641 aa2.3□□□□□ -2.04
CAST-229ENST00000510098 FNDC9Q8TBE3 224 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms