RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 HINT2Q9BX68 163 aa13.32□□□□□ -0.28
DDX41-207ENST00000507900 TPSG1Q9NRR2 321 aa13.32□□□□□ -0.28
DDX41-207ENST00000507900 SIGLEC9Q9Y336 463 aa13.32□□□□□ -0.28
DDX41-207ENST00000507900 FBXO7Q9Y3I1 522 aa13.32□□□□□ -0.28
DDX41-207ENST00000507900 MPDU1O75352 247 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 TSPAN15O95858 294 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 OPN1MWP04001 364 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 IFNA4P05014 189 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 OPN1MW2P0DN77 364 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 OPN1MW3P0DN78 364 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 FGF7P21781 194 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 UBE2E1P51965 193 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 PRSS8Q16651 343 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 LFNGQ8NES3 379 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 LINC00052Q96N35 136 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 NPCDR1Q9BY65 106 aa13.31□□□□□ -0.28
DDX41-207ENST00000507900 IGHV4-30-2A0A087WSY4 118 aa13.3□□□□□ -0.28
DDX41-207ENST00000507900 RNASE2P10153 161 aaKnown RBP13.3□□□□□ -0.28
DDX41-207ENST00000507900 PERPQ96FX8 193 aa13.3□□□□□ -0.28
DDX41-207ENST00000507900 A0A1B0GW64 132 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 BTBD17A6NE02 478 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 E7EUB6 86 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 SOX15O60248 233 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 CNTFRP26992 372 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 SNCAP37840 140 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 ERHP84090 104 aaKnown RBP13.29□□□□□ -0.28
DDX41-207ENST00000507900 PAX8Q06710 450 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 TMEM41BQ5BJD5 291 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 OR10W1Q8NGF6 305 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 RPRMQ9NS64 109 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
DDX41-207ENST00000507900 TRAV1-1A0A0B4J248 108 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 C17orf112F2Z3M2 114 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 LGALS4P56470 323 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 TUSC1Q2TAM9 212 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 C10orf55Q5SWW7 151 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 TREML4Q6UXN2 200 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 PPP1R27Q86WC6 154 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 BPIFCQ8NFQ6 507 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 NPBQ8NG41 125 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 NRGNQ92686 78 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 METTL1Q9UBP6 276 aaKnown RBP13.28□□□□□ -0.28
DDX41-207ENST00000507900 LSM4Q9Y4Z0 139 aaKnown RBP13.28□□□□□ -0.28
DDX41-207ENST00000507900 ABCA2Q9BZC7 2435 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 NDUFA3O95167 84 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 MOSP00540 346 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 CD5P06127 495 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 H2AFB1P0C5Y9 115 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 COMPP49747 757 aaPredicted RBP13.28□□□□□ -0.28
DDX41-207ENST00000507900 WT1-ASQ06250 92 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 EBI3Q14213 229 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 ARSJQ5FYB0 599 aaPredicted RBP13.28□□□□□ -0.28
DDX41-207ENST00000507900 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
DDX41-207ENST00000507900 MALSU1Q96EH3 234 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 SCRT1Q9BWW7 348 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 LPAR2Q9HBW0 351 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 NPVFQ9HCQ7 196 aa13.28□□□□□ -0.28
DDX41-207ENST00000507900 HBE1P02100 147 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 MBP02144 154 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 SLC25A16P16260 332 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 SRSF3P84103 164 aaKnown RBP13.27□□□□□ -0.29
DDX41-207ENST00000507900 SSX2Q16385 188 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 ZNF787Q6DD87 383 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 PVRIGQ6DKI7 326 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 ZNF709Q8N972 641 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 ZNF114Q8NC26 417 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 MBD3L1Q8WWY6 194 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 AJUBAQ96IF1 538 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 VSIRQ9H7M9 311 aa13.27□□□□□ -0.29
DDX41-207ENST00000507900 A0A1W2PRD5 423 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 A0A1W2PRF3 423 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 A0A1W2PRM7 423 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 IGLC7A0M8Q6 106 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 NBR2O15453 112 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 ACTL6BO94805 426 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 IGKV1D-33P01593 117 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 IGKV1-33P01594 117 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 RPL27AP46776 148 aaKnown RBP13.26□□□□□ -0.29
DDX41-207ENST00000507900 CCDC28AQ8IWP9 274 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 Q8N6K4 173 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 OR2T10Q8NGZ9 312 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 EAF1Q96JC9 268 aaPredicted RBP13.26□□□□□ -0.29
DDX41-207ENST00000507900 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
DDX41-207ENST00000507900 TACC2O95359 2948 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 SMCO3A2RU48 225 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 AGPAT2O15120 278 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 SUB1P53999 127 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX41-207ENST00000507900 SSBP2P81877 361 aaPredicted RBP13.25□□□□□ -0.29
DDX41-207ENST00000507900 ZNF726P1Q15940 193 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 TNXAQ16473 311 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 RNASEH2CQ8TDP1 164 aaKnown RBP13.25□□□□□ -0.29
DDX41-207ENST00000507900 CACNG8Q8WXS5 425 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 C1orf159Q96HA4 380 aa13.25□□□□□ -0.29
DDX41-207ENST00000507900 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
DDX41-207ENST00000507900 MGST2Q99735 147 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms