RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SMIM19Q96E16 107 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 NEU1Q99519 415 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 TM2D1Q9BX74 207 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 GABARAPL1Q9H0R8 117 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 Q9H3A6 140 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 MRPS7Q9Y2R9 242 aaKnown RBP8.73□□□□□ -1.01
LSM6-204ENST00000504181 PRELID3BQ9Y3B1 194 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 J3QRK9 145 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 EREGO14944 169 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 FABP7O15540 132 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 CYB5BO43169 146 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 CTSGP08311 255 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 CELP19835 753 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 DAD1P61803 113 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 RPL30P62888 115 aaKnown RBP8.72□□□□□ -1.01
LSM6-204ENST00000504181 RELQ04864 619 aaPredicted RBP8.72□□□□□ -1.01
LSM6-204ENST00000504181 UNC119Q13432 240 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 MEDAGQ5VYS4 303 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
LSM6-204ENST00000504181 SSX7Q7RTT5 188 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 OR10W1Q8NGF6 305 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
LSM6-204ENST00000504181 UQCC2Q9BRT2 126 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 CABLES2Q9BTV7 478 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 FAM107BQ9H098 131 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 VSIRQ9H7M9 311 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 RFNGQ9Y644 331 aa8.72□□□□□ -1.01
LSM6-204ENST00000504181 TRBV6-7A0A0A0MS04 114 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 SNTNA6NMZ2 147 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 ZNF705FA8MVS1 300 aaPredicted RBP8.71□□□□□ -1.02
LSM6-204ENST00000504181 K7EQG2 157 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 UBBP0CG47 229 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 ZNF705DP0CH99 300 aaPredicted RBP8.71□□□□□ -1.02
LSM6-204ENST00000504181 ZNF705BP0CI00 300 aaPredicted RBP8.71□□□□□ -1.02
LSM6-204ENST00000504181 RPS11P62280 158 aaKnown RBP eCLIP8.71□□□□□ -1.02
LSM6-204ENST00000504181 LRRTM1Q86UE6 522 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 NKAIN3Q8N8D7 197 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 GDPD1Q8N9F7 314 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 OR52I1Q8NGK6 324 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 OR4S2Q8NH73 311 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 GRAMD2BQ96HH9 432 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 ATP6V0BQ99437 205 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 AMBNQ9NP70 447 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 ZNF586Q9NXT0 402 aa8.71□□□□□ -1.02
LSM6-204ENST00000504181 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 OGG1O15527 345 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 LIMS3P0CW19 117 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 LIMS4P0CW20 117 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 FGF9P31371 208 aaPredicted RBP8.7□□□□□ -1.02
LSM6-204ENST00000504181 ERVFC1-1P60608 527 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 NUTF2P61970 127 aaKnown RBP8.7□□□□□ -1.02
LSM6-204ENST00000504181 USF2Q15853 346 aaPredicted RBP8.7□□□□□ -1.02
LSM6-204ENST00000504181 HSP90B2PQ58FF3 399 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 CBR4Q8N4T8 237 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 SLC29A1Q99808 456 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 GINS4Q9BRT9 223 aa8.7□□□□□ -1.02
LSM6-204ENST00000504181 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
LSM6-204ENST00000504181 PUS1Q9Y606 427 aaKnown RBP eCLIP8.7□□□□□ -1.02
LSM6-204ENST00000504181 LRP2P98164 4655 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 TCRBV3S1A0A5B6 114 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 K7EIM0 57 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 LALBAP00709 142 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 LINC00315P59091 139 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 FLOT2Q14254 428 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 CLINT1Q14677 625 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 YIF1BQ5BJH7 314 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
LSM6-204ENST00000504181 ZFP41Q8N8Y5 198 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 TCTEX1D2Q8WW35 142 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 ARHGAP5-AS1Q96IT6 56 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 RAB40CQ96S21 281 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 GINS3Q9BRX5 216 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 LPAR5Q9H1C0 372 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 HRASLSQ9HDD0 168 aa8.69□□□□□ -1.02
LSM6-204ENST00000504181 TRAV3A0A0B4J244 114 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
LSM6-204ENST00000504181 SERPINE2P07093 398 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 OR13C7P0DN81 318 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 FXYD7P58549 80 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 TAS2R43P59537 309 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 TIMM50Q3ZCQ8 353 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 MAFIPQ8WZ33 124 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 PECRQ9BY49 303 aa8.68□□□□□ -1.02
LSM6-204ENST00000504181 LOC102723971A0A1B0GUV8 181 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 A0A1W2PPQ1 181 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 TMEM14DPA8MWL7 114 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 HRASP01112 189 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 DNAH10OSP0CZ25 163 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 GCSHP23434 173 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 GNRHRP30968 328 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 ETV1P50549 477 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 TMEM50BP56557 158 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 WT1-ASQ06250 92 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 PSMG4Q5JS54 123 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 H1FOOQ8IZA3 346 aaPredicted RBP8.67□□□□□ -1.02
LSM6-204ENST00000504181 PGLYRP3Q96LB9 341 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 DERL3Q96Q80 235 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 QTRT1Q9BXR0 403 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms