RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 STEAP1BQ6NZ63 245 aa16.75■□□□□ 0.27
LSM6-203ENST00000503982 CLEC19AQ6UXS0 136 aa16.75■□□□□ 0.27
LSM6-203ENST00000503982 ZNF818PQ6ZRF7 136 aa16.75■□□□□ 0.27
LSM6-203ENST00000503982 SRRQ9GZT4 340 aa16.75■□□□□ 0.27
LSM6-203ENST00000503982 BET1LQ9NYM9 111 aa16.75■□□□□ 0.27
LSM6-203ENST00000503982 PTTG2Q9NZH5 202 aa16.75■□□□□ 0.27
LSM6-203ENST00000503982 OR2C1O95371 312 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 NQO2P16083 231 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 HIST1H1BP16401 226 aaKnown RBP16.74■□□□□ 0.27
LSM6-203ENST00000503982 TAS2R31P59538 309 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 CD81P60033 236 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 ERVK-16P61578 105 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 LPCAT3Q6P1A2 487 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 GDPD1Q8N9F7 314 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 OR2K2Q8NGT1 345 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 COMMD5Q9GZQ3 224 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 FXYD6Q9H0Q3 95 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 C19orf73Q9NVV2 129 aa16.74■□□□□ 0.27
LSM6-203ENST00000503982 ZNF320A2RRD8 509 aa16.73■□□□□ 0.27
LSM6-203ENST00000503982 GNRHRP30968 328 aa16.73■□□□□ 0.27
LSM6-203ENST00000503982 GUCA2BQ16661 112 aa16.73■□□□□ 0.27
LSM6-203ENST00000503982 CD300EQ496F6 205 aaPredicted RBP16.73■□□□□ 0.27
LSM6-203ENST00000503982 RNASE12Q5GAN4 147 aaKnown RBP16.73■□□□□ 0.27
LSM6-203ENST00000503982 TM2D3Q9BRN9 247 aa16.73■□□□□ 0.27
LSM6-203ENST00000503982 THAP7Q9BT49 309 aaPredicted RBP16.73■□□□□ 0.27
LSM6-203ENST00000503982 SLC2A8Q9NY64 477 aa16.73■□□□□ 0.27
LSM6-203ENST00000503982 A8MZ25 164 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 RBFOX2O43251 390 aaKnown RBP eCLIP16.72■□□□□ 0.27
LSM6-203ENST00000503982 S1PR2O95136 353 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 RAB3DO95716 219 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 AKAIN1P0CW23 69 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 LYL1P12980 280 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 CTRB1P17538 263 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 TSPAN5P62079 268 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 CTRB2Q6GPI1 263 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 CD300LFQ8TDQ1 290 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 SPATA25Q9BR10 227 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 PLEKHA3Q9HB20 300 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 TMEM140Q9NV12 185 aa16.72■□□□□ 0.27
LSM6-203ENST00000503982 A0A1B0GW64 132 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 M0QYG6 137 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 UPK2O00526 184 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 RLN1P04808 185 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 IFNA6P05013 189 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 CRYGCP07315 174 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 AP3S2P59780 193 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 FAM106AQ4KMX7 169 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 PYDC2Q56P42 97 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 OR4D10Q8NGI6 311 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 ZNF486Q96H40 463 aaPredicted RBP16.71■□□□□ 0.27
LSM6-203ENST00000503982 FANCD2OSQ96PS1 177 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 NEURL2Q9BR09 285 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 ZC4H2Q9NQZ6 224 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 SELENOKQ9Y6D0 94 aa16.71■□□□□ 0.27
LSM6-203ENST00000503982 TRAV3A0A0B4J244 114 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 C2orf70A6NJV1 201 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 FOLR2P14207 255 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 KLF9Q13886 244 aaPredicted RBP16.7■□□□□ 0.26
LSM6-203ENST00000503982 HAGHQ16775 308 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 CASC10Q5T4H9 136 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 SLC38A6Q8IZM9 456 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 TERB2Q8NHR7 220 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 CXorf58Q96LI9 332 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 HINT2Q9BX68 163 aa16.7■□□□□ 0.26
LSM6-203ENST00000503982 FAM212BQ9NTI7 297 aaPredicted RBP16.7■□□□□ 0.26
LSM6-203ENST00000503982 GPR31O00270 319 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 CYB5BO43169 146 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 EDN2P20800 178 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 OR2B8PP59922 312 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 SURF2Q15527 256 aaPredicted RBP16.69■□□□□ 0.26
LSM6-203ENST00000503982 ZFAND6Q6FIF0 208 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 OR4C16Q8NGL9 310 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 CCDC140Q96MF4 163 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 CITED4Q96RK1 184 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 PLEKHA2Q9HB19 425 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 COMMD9Q9P000 198 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 THYN1Q9P016 225 aa16.69■□□□□ 0.26
LSM6-203ENST00000503982 TRBV7-1A0A0A6YYK4 115 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 DISC1C4P0D8 188 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 RND3P61587 244 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 DEFB114Q30KQ6 69 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 ADAMTSL5Q6ZMM2 481 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 CMTM1Q8IZ96 169 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 CACNG8Q8WXS5 425 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 SDHCQ99643 169 aaPredicted RBP16.68■□□□□ 0.26
LSM6-203ENST00000503982 PRRT1Q99946 306 aa16.68■□□□□ 0.26
LSM6-203ENST00000503982 QTRT1Q9BXR0 403 aaKnown RBP16.68■□□□□ 0.26
LSM6-203ENST00000503982 TECRQ9NZ01 308 aaKnown RBP16.68■□□□□ 0.26
LSM6-203ENST00000503982 DNAH7Q8WXX0 4024 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 IGLV11-55A0A075B6I3 123 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 MFSD2BA6NFX1 497 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 CGB1A6NKQ9 187 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 LGALS9O00182 355 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 PGLYRP1O75594 196 aaPredicted RBP16.67■□□□□ 0.26
LSM6-203ENST00000503982 LPAR6P43657 344 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 MECP2P51608 486 aaKnown RBP16.67■□□□□ 0.26
LSM6-203ENST00000503982 GPHB5Q86YW7 130 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 MRGPRFQ96AM1 343 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 RYR3Q15413 4870 aa16.67■□□□□ 0.26
LSM6-203ENST00000503982 CLEC3BP05452 202 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms