RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 EAF1Q96JC9 268 aaPredicted RBP6.8□□□□□ -1.32
SF3A1-210ENST00000498259 FOXC2Q99958 501 aa6.8□□□□□ -1.32
SF3A1-210ENST00000498259 RASL11BQ9BPW5 248 aa6.8□□□□□ -1.32
SF3A1-210ENST00000498259 PSMG3Q9BT73 122 aaPredicted RBP6.8□□□□□ -1.32
SF3A1-210ENST00000498259 ARV1Q9H2C2 271 aa6.8□□□□□ -1.32
SF3A1-210ENST00000498259 ZNF430Q9H8G1 570 aaPredicted RBP6.8□□□□□ -1.32
SF3A1-210ENST00000498259 CYTL1Q9NRR1 136 aa6.8□□□□□ -1.32
SF3A1-210ENST00000498259 TRAV3A0A0B4J244 114 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 RNF223E7ERA6 249 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 SCGB2A1O75556 95 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 NDUFA3O95167 84 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 PRH1P02810 166 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 SPP1P10451 314 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 GPX4P36969 197 aaPredicted RBP6.79□□□□□ -1.32
SF3A1-210ENST00000498259 DLK1P80370 383 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 TMEM267Q0VDI3 215 aaPredicted RBP6.79□□□□□ -1.32
SF3A1-210ENST00000498259 TNXAQ16473 311 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 AKR1C8PQ5T2L2 129 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 ZNF562Q6V9R5 426 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 LHFPL4Q7Z7J7 247 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 TMED6Q8WW62 240 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 CFHR4Q92496 578 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 ZDHHC16Q969W1 377 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 Q96MF0 132 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 MEGF9Q9H1U4 602 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 NPVFQ9HCQ7 196 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 MED9Q9NWA0 146 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 THYN1Q9P016 225 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 TIMM9Q9Y5J7 89 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 LRRK2Q5S007 2527 aa6.79□□□□□ -1.32
SF3A1-210ENST00000498259 TRAV40A0A0B4J280 105 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 A0A1W2PRD5 423 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 A0A1W2PRF3 423 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 A0A1W2PRM7 423 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 ZNF705EA8MWA4 302 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-210ENST00000498259 FBXO24O75426 580 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 CFDP00746 253 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-210ENST00000498259 CRYGBP07316 175 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 S100A1P23297 94 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 SULT1A2P50226 295 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 DLX1P56177 255 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 KRTAP10-9P60411 292 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 GNB1P62873 340 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 C5orf64Q2M2E5 130 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 VWC2Q2TAL6 325 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 LRRC75BQ2VPJ9 315 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 TMEM249Q2WGJ8 235 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 C16orf82Q7Z2V1 217 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 HSD17B11Q8NBQ5 300 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 OR2G3Q8NGZ4 309 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 WDR61Q9GZS3 305 aaKnown RBP6.78□□□□□ -1.32
SF3A1-210ENST00000498259 CHD6Q8TD26 2715 aa6.78□□□□□ -1.32
SF3A1-210ENST00000498259 LINC00862A6NCI5 91 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 FGF16O43320 207 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 CA2P00918 260 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 OPN1MWP04001 364 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 FABP1P07148 127 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 OPN1MW2P0DN77 364 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 OPN1MW3P0DN78 364 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 OR13C7P0DN81 318 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 DEFA4P12838 97 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 CAMLGP49069 296 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 PRB3Q04118 309 aaPredicted RBP6.77□□□□□ -1.33
SF3A1-210ENST00000498259 HNF4GQ14541 408 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 FXYD3Q14802 87 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 SPINK9Q5DT21 86 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 PXDC1Q5TGL8 231 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 TEPPQ6URK8 271 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 COMMD1Q8N668 190 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 ZNF114Q8NC26 417 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 OR1P1Q8NH06 330 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 ABHD5Q8WTS1 349 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 SRSF12Q8WXF0 261 aaKnown RBP6.77□□□□□ -1.33
SF3A1-210ENST00000498259 TAF15Q92804 592 aaKnown RBP eCLIP6.77□□□□□ -1.33
SF3A1-210ENST00000498259 SLC35E1Q96K37 410 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 OR4C12Q96R67 309 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 FBXL15Q9H469 300 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 PARP11Q9NR21 331 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 DCHS2Q6V1P9 2916 aa6.77□□□□□ -1.33
SF3A1-210ENST00000498259 ARID1AO14497 2285 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 UBE2L5PA0A1B0GUS4 154 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 SMCO3A2RU48 225 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 HLA-DRB1P01911 266 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 HBE1P02100 147 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 IGHV4-31P0DP07 118 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 FGF7P21781 194 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 ATP6V0CP27449 155 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 AKR1C1Q04828 323 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 BSXQ3C1V8 233 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 CLEC9AQ6UXN8 241 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 CENPVQ7Z7K6 275 aaPredicted RBP6.76□□□□□ -1.33
SF3A1-210ENST00000498259 S100A7AQ86SG5 101 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 Q8N6K4 173 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 OR5R1Q8NH85 324 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 ARPC1AQ92747 370 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 C19orf24Q9BVV8 132 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms