RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 EMC6Q9BV81 110 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 C1QTNF6Q9BXI9 259 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 PECRQ9BY49 303 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 OR51I1Q9H343 314 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 POMKQ9H5K3 350 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 NOX3Q9HBY0 568 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 HEBP1Q9NRV9 189 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF226Q9NYT6 803 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 VPS29Q9UBQ0 182 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF222Q9UK12 451 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 SIGLEC7Q9Y286 467 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 IGSF9BQ9UPX0 1349 aa3.14□□□□□ -1.91
SF3B1-212ENST00000496458 COL1A2P08123 1366 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF638Q14966 1978 aaKnown RBP3.13□□□□□ -1.91
SF3B1-212ENST00000496458 TGIF2-C20orf24A0A0A6YYL0 155 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 LOC100130705A0A1B0GUX0 176 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 A0A1B0GXF2 115 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 GPR31O00270 319 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 PSPHP1O15172 72 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 CYB5BO43169 146 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 TNFSF15O95150 251 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 KCNE1P15382 129 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 NFYAP23511 347 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-212ENST00000496458 GADD45AP24522 165 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 CD52P31358 61 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 LGALS7P47929 136 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF138P52744 262 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 MAXP61244 160 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 HOXC5Q00444 222 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF616Q08AN1 781 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 EDDM3AQ14507 147 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 IHHQ14623 411 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 RGNQ15493 299 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 SMIM21Q3B7S5 101 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM97Q5BJF2 176 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 COA6Q5JTJ3 125 aaKnown RBP3.13□□□□□ -1.91
SF3B1-212ENST00000496458 COL5A1-AS1Q5SY13 56 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 FBXW12Q6X9E4 464 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 SLC36A1Q7Z2H8 476 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM61Q8N0U2 210 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 ZCCHC24Q8N2G6 241 aaKnown RBP3.13□□□□□ -1.91
SF3B1-212ENST00000496458 COX18Q8N8Q8 333 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 GPR26Q8NDV2 337 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 OR9Q1Q8NGQ5 310 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 OR10K1Q8NGX5 313 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 COQ8AQ8NI60 647 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 TBL1XR1Q9BZK7 514 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 C20orf27Q9GZN8 174 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 ABCG5Q9H222 651 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 EDA2RQ9HAV5 297 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 CCL28Q9NRJ3 127 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 DEC1Q9P2X7 70 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 MARCOQ9UEW3 520 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-212ENST00000496458 PRO0628Q9UI54 55 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 ANGPT4Q9Y264 503 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 SIP14410 1827 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 CACNA1HO95180 2353 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 CITO14578 2027 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 PIKFYVEQ9Y2I7 2098 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 PTPRJQ12913 1337 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 RIF1Q5UIP0 2472 aaKnown RBP3.13□□□□□ -1.91
SF3B1-212ENST00000496458 PTPRSQ13332 1948 aa3.13□□□□□ -1.91
SF3B1-212ENST00000496458 F5P12259 2224 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 DOCK6Q96HP0 2047 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 A0A0U1RQV1 116 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR5H1A6NKK0 313 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 K7ERU9 68 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 UPK1AO00322 258 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 UBFD1O14562 309 aaKnown RBP3.12□□□□□ -1.91
SF3B1-212ENST00000496458 NDUFS5O43920 106 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR2A4O95047 310 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 TRBV12-3P01733 135 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR5AC1P0C628 307 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 SDC2P34741 201 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 RPL22P35268 128 aaKnown RBP3.12□□□□□ -1.91
SF3B1-212ENST00000496458 AKR1C3P42330 323 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 TAS2R43P59537 309 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 DEFB103AP81534 67 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 LAMTOR4Q0VGL1 99 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 MOBPQ13875 183 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 PYDC2Q56P42 97 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 LRRC10Q5BKY1 277 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM255AQ5JRV8 349 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF660Q6AZW8 331 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-212ENST00000496458 DNAJC24Q6P3W2 148 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF493Q6ZR52 646 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 MUC15Q8N387 334 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 DEFB123Q8N688 67 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM161BQ8NDZ6 487 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR10D4PQ8NGN7 298 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 ABHD3Q8WU67 409 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR2V2Q96R30 315 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR2A7Q96R45 310 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 SFXN3Q9BWM7 321 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 OR51E2Q9H255 320 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 PRO1933Q9H354 126 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 TAS2R5Q9NYW4 299 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 HHLA2Q9UM44 414 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms