RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
VTI1A-209ENST00000496445 COMMD3Q9UBI1 195 aa10.75□□□□□ -0.69
VTI1A-209ENST00000496445 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 GPR31O00270 319 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 GPR183P32249 361 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 DEFB125Q8N687 156 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
VTI1A-209ENST00000496445 CXorf58Q96LI9 332 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 TUBA4BQ9H853 241 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 RETNQ9HD89 108 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 TECRQ9NZ01 308 aaKnown RBP10.74□□□□□ -0.69
VTI1A-209ENST00000496445 MLXQ9UH92 298 aa10.74□□□□□ -0.69
VTI1A-209ENST00000496445 APOA1P02647 267 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 CLEC3BP05452 202 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 LYL1P12980 280 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 ELK1P19419 428 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 CBLN1P23435 193 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 G6PCP35575 357 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 LPAR6P43657 344 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 MFAP2P55001 183 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 ERVK-16P61578 105 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 GUCA2BQ16661 112 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 THOC7Q6I9Y2 204 aaKnown RBP10.73□□□□□ -0.69
VTI1A-209ENST00000496445 SNX29P2Q8IUI4 249 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 TMEM61Q8N0U2 210 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 OR6F1Q8NGZ6 308 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 CMTM3Q96MX0 182 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 NAA50Q9GZZ1 169 aaKnown RBP10.73□□□□□ -0.69
VTI1A-209ENST00000496445 NDUFA4L2Q9NRX3 87 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 NSG2Q9Y328 171 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 CEPT1Q9Y6K0 416 aa10.73□□□□□ -0.69
VTI1A-209ENST00000496445 ZNF320A2RRD8 509 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 RBMY1BA6NDE4 496 aaKnown RBP10.72□□□□□ -0.69
VTI1A-209ENST00000496445 RBMY1EA6NEQ0 496 aaKnown RBP10.72□□□□□ -0.69
VTI1A-209ENST00000496445 DBX1A6NMT0 343 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 HPGDSO60760 199 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 TPPPO94811 219 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 KRASP01116 189 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 SERPINE2P07093 398 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 RBMY1DP0C7P1 496 aaKnown RBP10.72□□□□□ -0.69
VTI1A-209ENST00000496445 TRAPPC2P0DI81 140 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 TRAPPC2BP0DI82 140 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 SMIM18P0DKX4 95 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 OR13C7P0DN81 318 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 PTBP1P26599 531 aaKnown RBP eCLIP10.72□□□□□ -0.69
VTI1A-209ENST00000496445 FAM106AQ4KMX7 169 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 PHLDA2Q53GA4 152 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 TM4SF20Q53R12 229 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 BTNL8Q6UX41 500 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 CMTM1Q8IZ96 169 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 ISOC1Q96CN7 298 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 ZNF436Q9C0F3 470 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-209ENST00000496445 HIPK2Q9H2X6 1198 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 SRD5A3Q9H8P0 318 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 SLC2A8Q9NY64 477 aa10.72□□□□□ -0.69
VTI1A-209ENST00000496445 IGHV3-35A0A0C4DH35 117 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 TGOLN2O43493 480 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 RCVRNP35243 200 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 ZNF57Q68EA5 555 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-209ENST00000496445 ZFAND6Q6FIF0 208 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 HSD17B13Q7Z5P4 300 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-209ENST00000496445 CADM3Q8N126 398 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 UXS1Q8NBZ7 420 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 OR1L8Q8NGR8 309 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.69
VTI1A-209ENST00000496445 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 GAR1Q9NY12 217 aaKnown RBP10.71□□□□□ -0.69
VTI1A-209ENST00000496445 OR51B2Q9Y5P1 312 aa10.71□□□□□ -0.69
VTI1A-209ENST00000496445 F11RQ9Y624 299 aaKnown RBP10.71□□□□□ -0.69
VTI1A-209ENST00000496445 IGHV3-21A0A0B4J1V1 117 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 OR2T8A6NH00 312 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 C15orf61A6NNL5 157 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 F8W735 103 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-209ENST00000496445 GABARAPO95166 117 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 IGKV1-39P01597 117 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 IGKV1D-39P04432 117 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 C8orf88P0DMB2 117 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 CTF1Q16619 201 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 TBC1D26Q86UD7 250 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 VN1R17PQ8TDU5 208 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 HINT2Q9BX68 163 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 PALMDQ9NP74 551 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 THYN1Q9P016 225 aa10.7□□□□□ -0.7
VTI1A-209ENST00000496445 SMIM31A0A1B0GVY4 71 aa10.69□□□□□ -0.7
VTI1A-209ENST00000496445 M0QYG6 137 aa10.69□□□□□ -0.7
VTI1A-209ENST00000496445 SCAF4O95104 1147 aaKnown RBP10.69□□□□□ -0.7
VTI1A-209ENST00000496445 TSPAN5P62079 268 aa10.69□□□□□ -0.7
VTI1A-209ENST00000496445 RNASE12Q5GAN4 147 aaKnown RBP10.69□□□□□ -0.7
VTI1A-209ENST00000496445 PLET1Q6UQ28 207 aa10.69□□□□□ -0.7
VTI1A-209ENST00000496445 ZNF414Q96IQ9 312 aa10.69□□□□□ -0.7
VTI1A-209ENST00000496445 SEC22AQ96IW7 307 aa10.69□□□□□ -0.7
VTI1A-209ENST00000496445 FAM212BQ9NTI7 297 aaPredicted RBP10.69□□□□□ -0.7
VTI1A-209ENST00000496445 K7EIM0 57 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 SNAPC5O75971 98 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms