RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 OR6F1Q8NGZ6 308 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 SLC25A46Q96AG3 418 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 EEF1AKMT3Q96AZ1 226 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 WDR89Q96FK6 387 aaPredicted RBP7.25□□□□□ -1.25
MSH5-218ENST00000494646 CCDC140Q96MF4 163 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 NEURL2Q9BR09 285 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 FUNDC2Q9BWH2 189 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 HINT2Q9BX68 163 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 PLEKHA3Q9HB20 300 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 GAR1Q9NY12 217 aaKnown RBP7.25□□□□□ -1.25
MSH5-218ENST00000494646 NSG2Q9Y328 171 aa7.25□□□□□ -1.25
MSH5-218ENST00000494646 IGLV11-55A0A075B6I3 123 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 SMIM31A0A1B0GVY4 71 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 IGLC7A0M8Q6 106 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 HPGDSO60760 199 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 KRASP01116 189 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 GHRHP01286 108 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 TRAPPC2P0DI81 140 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 TRAPPC2BP0DI82 140 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 LYL1P12980 280 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 HIST1H1BP16401 226 aaKnown RBP7.24□□□□□ -1.25
MSH5-218ENST00000494646 NAT1P18440 290 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 F2RP25116 425 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 HRH1P35367 487 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 G6PCP35575 357 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 TSPAN5P62079 268 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 POU2AF1Q16633 256 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 FAM106AQ4KMX7 169 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 ZNF585BQ52M93 769 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 PHLDA2Q53GA4 152 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 SNX29P2Q8IUI4 249 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 OR2K2Q8NGT1 345 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 CD300LFQ8TDQ1 290 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 FCAMRQ8WWV6 532 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 MOB3AQ96BX8 217 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 DGCR14Q96DF8 476 aaKnown RBP7.24□□□□□ -1.25
MSH5-218ENST00000494646 WDR12Q9GZL7 423 aaKnown RBP7.24□□□□□ -1.25
MSH5-218ENST00000494646 WFDC10AQ9H1F0 79 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 PLEKHA2Q9HB19 425 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 ANAPC10Q9UM13 185 aa7.24□□□□□ -1.25
MSH5-218ENST00000494646 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
MSH5-218ENST00000494646 TRBV7-1A0A0A6YYK4 115 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 OR11H12B2RN74 326 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 LGALS9O00182 355 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 GPR31O00270 319 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 TPPPO94811 219 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 OR13C7P0DN81 318 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 ELK1P19419 428 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 GPR183P32249 361 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 TAS2R46P59540 309 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 ERVK-16P61578 105 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 KLK9Q2XQG4 91 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 RNASE12Q5GAN4 147 aaKnown RBP7.23□□□□□ -1.25
MSH5-218ENST00000494646 FAM209BQ5JX69 171 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 UNQ9165/PRO28630Q6UXU0 137 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 CMTM1Q8IZ96 169 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 UXS1Q8NBZ7 420 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 GPX8Q8TED1 209 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 BORCS5Q969J3 196 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 CXorf58Q96LI9 332 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 SPATA25Q9BR10 227 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 QTRT1Q9BXR0 403 aaKnown RBP7.23□□□□□ -1.25
MSH5-218ENST00000494646 NAA50Q9GZZ1 169 aaKnown RBP7.23□□□□□ -1.25
MSH5-218ENST00000494646 FXYD6Q9H0Q3 95 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 RETNQ9HD89 108 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 PALMDQ9NP74 551 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 SLC2A8Q9NY64 477 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 MLXQ9UH92 298 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 OR51B2Q9Y5P1 312 aa7.23□□□□□ -1.25
MSH5-218ENST00000494646 TMEM213A2RRL7 107 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 DBX1A6NMT0 343 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 MARCH11A6NNE9 402 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 FAM25AB3EWG3 89 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 FAM25CB3EWG5 89 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 FAM25GB3EWG6 89 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 SNAPC5O75971 98 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
MSH5-218ENST00000494646 APOA1P02647 267 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 IFNA6P05013 189 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 SERPINE2P07093 398 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 RORCP51449 518 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 MFAP2P55001 183 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 WT1-ASQ06250 92 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 ZNF57Q68EA5 555 aaPredicted RBP7.22□□□□□ -1.25
MSH5-218ENST00000494646 PLET1Q6UQ28 207 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 OR1L8Q8NGR8 309 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 ZNF502Q8TBZ5 544 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 FAM110AQ9BQ89 295 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 SRD5A3Q9H8P0 318 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 EDA2RQ9HAV5 297 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 NDUFA4L2Q9NRX3 87 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 TECRQ9NZ01 308 aaKnown RBP7.22□□□□□ -1.25
MSH5-218ENST00000494646 COMMD9Q9P000 198 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 THYN1Q9P016 225 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 CEPT1Q9Y6K0 416 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 ALMS1Q8TCU4 4167 aa7.22□□□□□ -1.25
MSH5-218ENST00000494646 RBMY1BA6NDE4 496 aaKnown RBP7.21□□□□□ -1.26
MSH5-218ENST00000494646 RBMY1EA6NEQ0 496 aaKnown RBP7.21□□□□□ -1.26
MSH5-218ENST00000494646 OR2T8A6NH00 312 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms