RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 P2RX4Q99571 388 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 CLEC7AQ9BXN2 247 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 NPVFQ9HCQ7 196 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 SLC39A9Q9NUM3 307 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 CTSZQ9UBR2 303 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 WDR83OSQ9Y284 106 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 ARFGEF3Q5TH69 2177 aa8.15□□□□□ -1.11
PRPF3-206ENST00000493553 PKD1L2Q7Z442 2459 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 CTXND1A0A1B0GTU2 59 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 MEX3AA1L020 520 aaKnown RBP8.14□□□□□ -1.11
PRPF3-206ENST00000493553 PMS2P5A8MQ11 134 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 OOSP1A8MZH6 123 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 MMP23AO75900 390 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 CCL3L1P16619 93 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 OPRK1P41145 380 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 RPS16P62249 146 aaKnown RBP8.14□□□□□ -1.11
PRPF3-206ENST00000493553 RUNX1Q01196 453 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 ARL16Q0P5N6 197 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 RHEBQ15382 184 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 KIR3DL3Q8N743 410 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 TEX45Q8NA69 505 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 LY6G5BQ8NDX9 201 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 ITLN2Q8WWU7 325 aaPredicted RBP8.14□□□□□ -1.11
PRPF3-206ENST00000493553 ST6GALNAC6Q969X2 333 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 NABP2Q9BQ15 211 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 TXNDC17Q9BRA2 123 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 C19orf24Q9BVV8 132 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 MRPL20Q9BYC9 149 aaKnown RBP8.14□□□□□ -1.11
PRPF3-206ENST00000493553 MS4A7Q9GZW8 240 aaPredicted RBP8.14□□□□□ -1.11
PRPF3-206ENST00000493553 PATZ1Q9HBE1 687 aaKnown RBP8.14□□□□□ -1.11
PRPF3-206ENST00000493553 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 PRELID1Q9Y255 219 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 COL6A6A6NMZ7 2263 aa8.14□□□□□ -1.11
PRPF3-206ENST00000493553 A0A1W2PPE3 182 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 C1QL1O75973 258 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 MT-CO2P00403 227 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 IGHV3-7P01780 117 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 MDKP21741 143 aaPredicted RBP8.13□□□□□ -1.11
PRPF3-206ENST00000493553 COL8A2P25067 703 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 GPX4P36969 197 aaPredicted RBP8.13□□□□□ -1.11
PRPF3-206ENST00000493553 EFNA4P52798 201 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 BTN1A1Q13410 526 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 HLA-DRB5Q30154 266 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 C2orf83Q53S99 150 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 ZNF841Q6ZN19 808 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 MMD2Q8IY49 270 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 NANPQ8TBE9 248 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
PRPF3-206ENST00000493553 RSG1Q9BU20 258 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 NPCDR1Q9BY65 106 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 FAM96BQ9Y3D0 163 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 DSCAML1Q8TD84 2053 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 ACACBO00763 2458 aa8.13□□□□□ -1.11
PRPF3-206ENST00000493553 TANC2Q9HCD6 1990 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 LOC105371242A0A075B767 164 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 IGHV2-26A0A0B4J1V2 119 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 MAP1LC3B2A6NCE7 125 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 B4DEV8 164 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 ACTL6BO94805 426 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 IGLV1-47P01700 117 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 PAX6P26367 422 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 GPR6P46095 362 aaPredicted RBP8.12□□□□□ -1.11
PRPF3-206ENST00000493553 PSMB3P49720 205 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 FHITP49789 147 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 AKR1C1Q04828 323 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 SSX2Q16385 188 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 FAM74A3Q4VXF1 159 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 FFAR4Q5NUL3 377 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 SP5Q6BEB4 398 aaPredicted RBP8.12□□□□□ -1.11
PRPF3-206ENST00000493553 ETFRF1Q6IPR1 90 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 CCDC144NLQ6NUI1 221 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 SPSB3Q6PJ21 355 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 CLRN3Q8NCR9 226 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 OR10G9Q8NGN4 311 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 OR10G7Q8NGN6 311 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 RNASEH2CQ8TDP1 164 aaKnown RBP8.12□□□□□ -1.11
PRPF3-206ENST00000493553 RPEQ96AT9 228 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 SSBP3Q9BWW4 388 aaPredicted RBP8.12□□□□□ -1.11
PRPF3-206ENST00000493553 MAP1LC3BQ9GZQ8 125 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 VAX2Q9UIW0 290 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 INSIG2Q9Y5U4 225 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 HIVEP3Q5T1R4 2406 aa8.12□□□□□ -1.11
PRPF3-206ENST00000493553 LOC400499M0QZD8 3231 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 TEX50A0A1B0GTY4 177 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 A6NNC1 897 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 SEC14L6B5MCN3 397 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 FAM157AC9JC47 383 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 BUB1B-PAK6H3BSN5 160 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 ENSAO43768 121 aaKnown RBP8.11□□□□□ -1.11
PRPF3-206ENST00000493553 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
PRPF3-206ENST00000493553 BCL2P10415 239 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 PRTN3P24158 256 aa8.11□□□□□ -1.11
PRPF3-206ENST00000493553 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
PRPF3-206ENST00000493553 LINC00205P59089 165 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms