RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	HOXA1	P49639	335 aa	Predicted RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	F2RL1	P55085	397 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	HBG1	P69891	147 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	HBG2	P69892	147 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	PRB3	Q04118	309 aa	Predicted RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	HES1	Q14469	280 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	PLGLA	Q15195	96 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502		Q6YL49	198 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	LHFPL4	Q7Z7J7	247 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	TMEM86B	Q8N661	226 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	OR1L8	Q8NGR8	309 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	QTRT1	Q9BXR0	403 aa	Known RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	HEYL	Q9NQ87	328 aa	Predicted RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	PLSCR3	Q9NRY6	295 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	STRAP	Q9Y3F4	350 aa	Known RBP	10.81	□□□□□ -0.68
NUP188-208	ENST00000491502		U3KQ87	197 aa		10.81	□□□□□ -0.68
NUP188-208	ENST00000491502	SRRM4	A7MD48	611 aa	Known RBP	10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	JTB	O76095	146 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	NXPH3	O95157	252 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	SAA4	P35542	130 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	SULT1A1	P50225	295 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	OR2B8P	P59922	312 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	FOXL1	Q12952	345 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	RUSC1-AS1	Q66K80	236 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	EIF5AL1	Q6IS14	154 aa	Known RBP	10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	ZNF767P	Q75MW2	155 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	TMEM252	Q8N6L7	170 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	ZNF471	Q9BX82	626 aa	Predicted RBP	10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	PLEKHA3	Q9HB20	300 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	BOLA1	Q9Y3E2	137 aa		10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	SOX21	Q9Y651	276 aa	Predicted RBP	10.8	□□□□□ -0.68
NUP188-208	ENST00000491502	HOXA3	O43365	443 aa	Predicted RBP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	SLC25A17	O43808	307 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	TSPAN9	O75954	239 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	DFFB	O76075	338 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	IGKV1D-33	P01593	117 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	IGKV1-33	P01594	117 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	SNRNP70	P08621	437 aa	Known RBP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	IAPP	P10997	89 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	TPT1	P13693	172 aa	Known RBP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	DYNLT3	P51808	116 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	RAB11A	P62491	216 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	ERH	P84090	104 aa	Known RBP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	EBI3	Q14213	229 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	ZNF266	Q14584	549 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	PSG5	Q15238	335 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	MMD	Q15546	238 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	OR1S2	Q8NGQ3	325 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	CFHR4	Q92496	578 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	DUX5	Q96PT3	197 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	C11orf1	Q9H5F2	150 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	METTL1	Q9UBP6	276 aa	Known RBP	10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	TCF19	Q9Y242	345 aa		10.79	□□□□□ -0.68
NUP188-208	ENST00000491502	MDFIC2	A0A1B0GVS7	189 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	FAM24A	A6NFZ4	105 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	RRH	O14718	337 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	NBR2	O15453	112 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	IGLV2-23	P01705	113 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	FBP1	P09467	338 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	TMEM11	P17152	192 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	SUB1	P53999	127 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	PRCD	Q00LT1	54 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	ATP6V1F	Q16864	119 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	SPANXN5	Q5MJ07	72 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	PPP1R27	Q86WC6	154 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	C3orf56	Q8N813	242 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	NPB	Q8NG41	125 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	SSMEM1	Q8WWF3	244 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	PINX1	Q96BK5	328 aa	Known RBP	10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	PHYHIPL	Q96FC7	376 aa		10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	EAF1	Q96JC9	268 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP188-208	ENST00000491502	TRAV3	A0A0B4J244	114 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502		A0A0U1RQK1	487 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	TEX50	A0A1B0GTY4	177 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	MSGN1	A6NI15	193 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	HAX1	O00165	279 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	RGS13	O14921	159 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	IFNA10	P01566	189 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	CRYBA1	P05813	215 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	SNCA	P37840	140 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	HTR2B	P41595	481 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	PAX9	P55771	341 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	RPL15	P61313	204 aa	Known RBP	10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	AANAT	Q16613	207 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	PRSS8	Q16651	343 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	LDLRAD2	Q5SZI1	272 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	PIP4P2	Q8N4L2	257 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	OR10P1	Q8NGE3	313 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	STOML3	Q8TAV4	291 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	SRSF8	Q9BRL6	282 aa	Known RBP	10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	HINT2	Q9BX68	163 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	MEGF9	Q9H1U4	602 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	PAIP2B	Q9ULR5	123 aa	Known RBP	10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	SIGLEC9	Q9Y336	463 aa		10.77	□□□□□ -0.69
NUP188-208	ENST00000491502	IGSF23	A1L1A6	192 aa		10.76	□□□□□ -0.69
NUP188-208	ENST00000491502	INS-IGF2	F8WCM5	200 aa		10.76	□□□□□ -0.69
NUP188-208	ENST00000491502	NDUFA3	O95167	84 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms