RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 NRBF2Q96F24 287 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 ATP6V0BQ99437 205 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 VSIRQ9H7M9 311 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 CHMP1AQ9HD42 196 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 Q9N2K0 584 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 IMPAD1Q9NX62 359 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 XCL2Q9UBD3 114 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 EXOGQ9Y2C4 368 aaKnown RBP4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 K7EQG2 157 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 DNASE2O00115 360 aaPredicted RBP4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 IFNA5P01569 189 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 APOHP02749 345 aaPredicted RBP4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 CD5P06127 495 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 CD3GP09693 182 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 P0C879 139 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 DNAH10OSP0CZ25 163 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 HTR2CP28335 458 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 ALDH3B2P48448 385 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 OR2B8PP59922 312 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 KRTAP10-4P60372 401 aaPredicted RBP4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 MRPL28Q13084 256 aaKnown RBP4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 PLA2G7Q13093 441 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 ACTL10Q5JWF8 245 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 KDM4DQ6B0I6 523 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 OR10K2Q6IF99 312 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 ARHGAP24Q8N264 748 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 LGALS12Q96DT0 336 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 GRAMD2BQ96HH9 432 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 ADTRPQ96IZ2 230 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 TMEM70Q9BUB7 260 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 C1QTNF4Q9BXJ3 329 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 RIMS4Q9H426 269 aaPredicted RBP4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 C21orf62Q9NYP8 219 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 AK3Q9UIJ7 227 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 RFNGQ9Y644 331 aa4.89□□□□□ -1.63
PDLIM1-203ENST00000490391 TRAV14DV4A0A0A6YYC5 116 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 A0A0A6YYD4 124 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 IGHV3-21A0A0B4J1V1 117 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 TRBV5-5A0A0J9YX44 114 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 RPS10-NUDT3A0A1W2PQS6 291 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 SMIM9A6NGZ8 99 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 K7EIM0 57 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 FCGR3BO75015 233 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 NUDT3O95989 172 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 ZNF688P0C7X2 276 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 SRMP19623 302 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 CELP19835 753 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 GCSHP23434 173 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 FGF9P31371 208 aaPredicted RBP4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 ASIPP42127 132 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 ERVFC1-1P60608 527 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 CDH26Q8IXH8 852 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 CBR4Q8N4T8 237 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 DUSP18Q8NEJ0 188 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 SCARB1Q8WTV0 552 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 UPK3BQ9BT76 320 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 ZNF586Q9NXT0 402 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 THYN1Q9P016 225 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 MGAT4AQ9UM21 535 aa4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 YTHDF2Q9Y5A9 579 aaKnown RBP4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 PUS1Q9Y606 427 aaKnown RBP eCLIP4.88□□□□□ -1.63
PDLIM1-203ENST00000490391 LPAP08519 4548 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 A0A087WTM6 91 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 TRBV6-7A0A0A0MS04 114 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 ST8SIA3O43173 380 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 PRB4P10163 310 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 HLA-GP17693 338 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 GNRHRP30968 328 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 SERPINB10P48595 397 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 GBX2P52951 348 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 DAD1P61803 113 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 RPS11P62280 158 aaKnown RBP eCLIP4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 RPL30P62888 115 aaKnown RBP4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 RPL8P62917 257 aaKnown RBP4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 UNC119Q13432 240 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 ATP6AP1Q15904 470 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 IGSF11Q5DX21 431 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 TMEM69Q5SWH9 247 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 GSG1LQ6UXU4 331 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 GDPD1Q8N9F7 314 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 VSTM2AQ8TAG5 236 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 DCANP1Q8TF63 244 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 RAB40CQ96S21 281 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 CABLES2Q9BTV7 478 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 TM2D1Q9BX74 207 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 FNDC4Q9H6D8 234 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 C12orf4Q9NQ89 552 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 PRR13Q9NZ81 148 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 FAM30AQ9NZY2 134 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 RABAC1Q9UI14 185 aa4.87□□□□□ -1.63
PDLIM1-203ENST00000490391 IGHV3-66A0A0C4DH42 116 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 AQP12BA6NM10 295 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 FOXI3A8MTJ6 420 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 TRDCB7Z8K6 153 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 RAB27BO00194 218 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 FKBP6O75344 327 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 YIF1AO95070 293 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 GNB3P16520 340 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 RELQ04864 619 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms