RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FGF12P61328 243 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 KIAA2026Q5HYC2 2103 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 LRBAP50851 2863 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 KIR2DS1A0A191URI9 304 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 HMGB3O15347 200 aaKnown RBP11.32□□□□□ -0.6
COPS7B-221ENST00000488111 NXPH2O95156 264 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 IGKV1-39P01597 117 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 IGKV1D-39P04432 117 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 SERPINE2P07093 398 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 KIR2DS4P43632 304 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 SLC38A11Q08AI6 406 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 KIR2DS1Q14954 304 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
COPS7B-221ENST00000488111 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
COPS7B-221ENST00000488111 B9A039 149 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 S100GP29377 79 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 LRRC29Q8WV35 223 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 IL19Q9UHD0 177 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 CHD3Q12873 2000 aaKnown RBP11.31□□□□□ -0.6
COPS7B-221ENST00000488111 DOPEY1Q5JWR5 2465 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
COPS7B-221ENST00000488111 PAGE4O60829 102 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 NDUFB8O95169 186 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 TFF1P04155 84 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 TNFSF4P23510 183 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 ERVK11-1P61568 191 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 EFNB3Q15768 340 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 C22orf15Q8WYQ4 148 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
COPS7B-221ENST00000488111 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
COPS7B-221ENST00000488111 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 HSPB6O14558 160 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 EGR1P18146 543 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 FAM201AQ5SY85 155 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 TMEM14EPQ6UXP3 125 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 OR5T1Q8NG75 326 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 OR10G9Q8NGN4 311 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 OR10G7Q8NGN6 311 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 CACNA1DQ01668 2161 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 IGKV1-5P01602 117 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 CTRLP40313 264 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
COPS7B-221ENST00000488111 MSMO1Q15800 293 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 SPANXN5Q5MJ07 72 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 OR51H1Q8NH63 302 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
COPS7B-221ENST00000488111 C20orf202A1L168 122 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 SERF1AO75920 110 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 CLDN1O95832 211 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 CDKN1BP46527 198 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 MS4A5Q9H3V2 200 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
COPS7B-221ENST00000488111 PATZ1Q9HBE1 687 aaKnown RBP11.29□□□□□ -0.6
COPS7B-221ENST00000488111 HRNRQ86YZ3 2850 aaPredicted RBP11.29□□□□□ -0.6
COPS7B-221ENST00000488111 TRAV39A0A0B4J263 110 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 K7EP13 123 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 CCL25O15444 150 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 MMP23AO75900 390 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 GNB1P62873 340 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 GCSAMQ8N6F7 178 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 STPG4Q8N801 248 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 Q8N976 141 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
COPS7B-221ENST00000488111 SAP30LQ9HAJ7 183 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 PPP1R3CQ9UQK1 317 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 OR2W1Q9Y3N9 320 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 IGHV3OR15-7A0A075B7D8 119 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 KRASP01116 189 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 GATA4P43694 442 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 MMDQ15546 238 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 Q8IYB0 196 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 RDH5Q92781 318 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
COPS7B-221ENST00000488111 UTP20O75691 2785 aaKnown RBP11.27□□□□□ -0.6
COPS7B-221ENST00000488111 SIRPB1O00241 398 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 PDE6DO43924 150 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 ADH4P08319 380 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.6
COPS7B-221ENST00000488111 ATP6V1FQ16864 119 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 ACP7Q6ZNF0 438 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 SFRP2Q96HF1 295 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 HES4Q9HCC6 221 aa11.27□□□□□ -0.6
COPS7B-221ENST00000488111 DCHS2Q6V1P9 2916 aa11.27□□□□□ -0.61
COPS7B-221ENST00000488111 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.61
COPS7B-221ENST00000488111 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.61
COPS7B-221ENST00000488111 DEGS1O15121 323 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms