RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SUPT4H1P63272 117 aaKnown RBP0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 COQ5Q5HYK3 327 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 C9orf64Q5T6V5 341 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 C10orf67Q8IYJ2 551 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 TMEM86BQ8N661 226 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 ZNF439Q8NDP4 499 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 C10orf105Q8TEF2 133 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 PTH2Q96A98 100 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 CNBD2Q96M20 576 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 PARD6GQ9BYG4 376 aaPredicted RBP0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 IL36BQ9NZH7 164 aa0.76□□□□□ -2.29
R3HDM1-219ENST00000488035 IGKV1D-43A0A0B4J1Z2 117 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 ACOX3O15254 700 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 IGHV3-7P01780 117 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 ISG15P05161 165 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 MSMBP08118 114 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 SULT1A3P0DMM9 295 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 SULT1A4P0DMN0 295 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 KCNE1P15382 129 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 HAAOP46952 286 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 RAB5BP61020 215 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 HIST1H4AP62805 103 aaKnown RBP0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 RPL18Q07020 188 aaKnown RBP0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 PMAIP1Q13794 54 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 BATFQ16520 125 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 OGFRL1Q5TC84 451 aaPredicted RBP0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 UNQ6190/PRO20217Q6UXQ8 127 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 Q8N2B8 174 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 TMEM86AQ8N2M4 240 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 RNF133Q8WVZ7 376 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 MBD3L1Q8WWY6 194 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 ROPN1LQ96C74 230 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 CYSTM1Q9H1C7 97 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 EFCAB1Q9HAE3 211 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 TP73-AS1Q9UF72 201 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 RSL24D1Q9UHA3 163 aaKnown RBP0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 LHFPL6Q9Y693 200 aa0.75□□□□□ -2.29
R3HDM1-219ENST00000488035 GLI3P10071 1580 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 DLG5Q8TDM6 1919 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 TONSLQ96HA7 1378 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 TRBV20OR9-2A0A075B6H5 130 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 TRBV10-2A0A0K0K1G8 114 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 TRAPPC13A5PLN9 417 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 KCNK1O00180 336 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 CLPSP04118 112 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 KRT7P08729 469 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 RPSAP08865 295 aaKnown RBP0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 MYL12AP19105 171 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 CDK5R1Q15078 307 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 C8orf74Q6P047 294 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 OTUD6BQ8N6M0 293 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 OR8B3Q8NGG8 313 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 ADAT1Q9BUB4 502 aaKnown RBP0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 BAIAP2Q9UQB8 552 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 SMARCA4P51532 1647 aa0.74□□□□□ -2.29
R3HDM1-219ENST00000488035 DCCP43146 1447 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 C9orf84Q5VXU9 1444 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 SETD5Q9C0A6 1442 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 EEF1E1-BLOC1S5C9J1V9 151 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 SLC22A1O15245 554 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 IFNA5P01569 189 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 PRM2P04554 102 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 CALB1P05937 261 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 UBBP0CG47 229 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 UCHL3P15374 230 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 RPS4Y1P22090 263 aaKnown RBP0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 EIF2B2P49770 351 aaKnown RBP0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 AP2S1P53680 142 aaPredicted RBP0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 CCL20P78556 96 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 CAV1Q03135 178 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 ZNF345Q14585 488 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 SURF2Q15527 256 aaPredicted RBP0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 SYPL2Q5VXT5 272 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 GLT8D1Q68CQ7 371 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 DHFR2Q86XF0 187 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 SLC35B4Q969S0 331 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 OPTNQ96CV9 577 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 PKIGQ9Y2B9 76 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 POLEQ07864 2286 aa0.73□□□□□ -2.29
R3HDM1-219ENST00000488035 TECTAO75443 2155 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 MEIKINA0A087WXM9 373 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 IGKV3D-7A0A0C4DH55 119 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 IGKV3OR2-268A0A0C4DH90 116 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 TMEM212A6NML5 194 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 FABP5P3A8MUU1 101 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 MRPS14O60783 128 aaKnown RBP0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 IGKV1-5P01602 117 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 TNNC2P02585 160 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 PMP2P02689 132 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 C1QAP02745 245 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 SHBGP04278 402 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 NKX2-5P52952 324 aaPredicted RBP0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 DEFA1P59665 94 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 CTAG1AP78358 180 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 IFITM2Q01629 132 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 ELOBQ15370 118 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 GRK1Q15835 563 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 HIST2H3PS2Q5TEC6 136 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 AADACL3Q5VUY0 350 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms