RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	SERF2	P84101	59 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	BSX	Q3C1V8	233 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	DPPA3	Q6W0C5	159 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	CXorf58	Q96LI9	332 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	SRSF8	Q9BRL6	282 aa	Known RBP	11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	KIAA1456	Q9P272	454 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	ARHGAP32	A7KAX9	2087 aa		11.81	□□□□□ -0.52
FGFR1-222	ENST00000487647	FNDC10	F2Z333	226 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	NBR2	O15453	112 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	MPDU1	O75352	247 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	NDUFA3	O95167	84 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	CA2	P00918	260 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	IGKV1D-33	P01593	117 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	IGKV1-33	P01594	117 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	IFNA4	P05014	189 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	SNRNP70	P08621	437 aa	Known RBP	11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	FAM106CP	P0CH98	169 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	SUB1	P53999	127 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	MRGPRG-AS1	Q2M3A8	158 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	LINC01356	Q8N9X3	169 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	TAF15	Q92804	592 aa	Known RBP eCLIP	11.8	□□□□□ -0.52	2e-6	■□□□□ 10.1
FGFR1-222	ENST00000487647	RBMXL1	Q96E39	390 aa	Known RBP	11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	EAF1	Q96JC9	268 aa	Predicted RBP	11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647	SH3BGRL3	Q9H299	93 aa		11.8	□□□□□ -0.52
FGFR1-222	ENST00000487647		A0A096LNT2	108 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	PRSS46	E5RG02	174 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	OPN1MW	P04001	364 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	OPN1MW2	P0DN77	364 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	OPN1MW3	P0DN78	364 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	MYOD1	P15172	320 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	MDK	P21741	143 aa	Predicted RBP	11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	COMP	P49747	757 aa	Predicted RBP	11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	MMD	Q15546	238 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	EIF4E3	Q8N5X7	224 aa	Known RBP	11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	TMEM170A	Q8WVE7	144 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	PLA2G2E	Q9NZK7	142 aa		11.79	□□□□□ -0.52
FGFR1-222	ENST00000487647	IGHV1-69D	A0A0B4J2H0	117 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	IGHV1-69	P01742	117 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	PRH1	P02810	166 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	SAA4	P35542	130 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	RPL27A	P46776	148 aa	Known RBP	11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	AKR1C8P	Q5T2L2	129 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	DYNAP	Q8N1N2	210 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647		Q8N6K4	173 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	AJUBA	Q96IF1	538 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	C7orf69	Q9H7B7	122 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	C1RL	Q9NZP8	487 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	PTPN13	Q12923	2485 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	MED13L	Q71F56	2210 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	UBE2L5P	A0A1B0GUS4	154 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	MFSD2B	A6NFX1	497 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	C17orf112	F2Z3M2	114 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647		J3QLI3	93 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	TSPAN9	O75954	239 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	RNASE2	P10153	161 aa	Known RBP	11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	CNTFR	P26992	372 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	HES1	Q14469	280 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	PLGLA	Q15195	96 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	TNXA	Q16473	311 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	PXDC1	Q5TGL8	231 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	CITED4	Q96RK1	184 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	FBXL15	Q9H469	300 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	TPSG1	Q9NRR2	321 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	HIF1AN	Q9NWT6	349 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	WDR83OS	Q9Y284	106 aa		11.78	□□□□□ -0.52
FGFR1-222	ENST00000487647	RAB19	A4D1S5	217 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	CGB1	A6NKQ9	187 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	CAMLG	P49069	296 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	RUNX1	Q01196	453 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	PJVK	Q0ZLH3	352 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647		Q5PR19	223 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	IL34	Q6ZMJ4	242 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647		Q6ZRG5	221 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	PIP4P2	Q8N4L2	257 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	ZNF709	Q8N972	641 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	ZNF114	Q8NC26	417 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	OR10W1	Q8NGF6	305 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	LYPD6B	Q8NI32	183 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	CACNG8	Q8WXS5	425 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	MARC2	Q969Z3	335 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647	NPVF	Q9HCQ7	196 aa		11.77	□□□□□ -0.53
FGFR1-222	ENST00000487647		E7EUB6	86 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	MB	P02144	154 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	FGF7	P21781	194 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	GPX4	P36969	197 aa	Predicted RBP	11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	BPIFB3	P59826	476 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	WT1-AS	Q06250	92 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	HNF4G	Q14541	408 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	C5orf64	Q2M2E5	130 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	TUSC1	Q2TAM9	212 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	BTNL8	Q6UX41	500 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	COMMD1	Q8N668	190 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	C17orf50	Q8WW18	174 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	REG4	Q9BYZ8	158 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	FBXO7	Q9Y3I1	522 aa		11.76	□□□□□ -0.53
FGFR1-222	ENST00000487647	WNK2	Q9Y3S1	2297 aa		11.75	□□□□□ -0.53
FGFR1-222	ENST00000487647	OR13C7	P0DN81	318 aa		11.75	□□□□□ -0.53

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