RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CDPF1Q6NVV7 123 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 MMD2Q8IY49 270 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 C8orf59Q8N0T1 100 aaPredicted RBP3.98□□□□□ -1.77
COL4A3-206ENST00000487633 C1orf158Q8N1D5 194 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 UBAC2Q8NBM4 344 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 DCANP1Q8TF63 244 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 SCARB1Q8WTV0 552 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 MAFIPQ8WZ33 124 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 RNF125Q96EQ8 232 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 OR10C1Q96KK4 312 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 CXorf58Q96LI9 332 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 S100A13Q99584 98 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 OR51E2Q9H255 320 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 VSIRQ9H7M9 311 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 ABRACLQ9P1F3 81 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 IGKV1D-8A0A087WSZ0 117 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 IRGMA1A4Y4 181 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 TMEM212A6NML5 194 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 DNASE2O00115 360 aaPredicted RBP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 SOCS1O15524 211 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 ST8SIA3O43173 380 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 ZNF780AO75290 641 aaPredicted RBP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 ACTL6BO94805 426 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 ATP6V1G2O95670 118 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 IFNA5P01569 189 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 GLAP06280 429 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 GSTT2P0CG29 244 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 GSTT2BP0CG30 244 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 DEFA4P12838 97 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 GABRB1P18505 474 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 MYL12AP19105 171 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 AQP4P55087 323 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 CMC4P56277 68 aaPredicted RBP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 RPS11P62280 158 aaKnown RBP eCLIP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 WT1-ASQ06250 92 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 UNC119Q13432 240 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 GPR176Q14439 515 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 OXA1LQ15070 435 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 SMN1Q16637 294 aaKnown RBP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 YIF1BQ5BJH7 314 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 LIPKQ5VXJ0 399 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 IZUMO2Q6UXV1 221 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 LRRTM1Q86UE6 522 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 SLC25A42Q86VD7 318 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 JAGN1Q8N5M9 183 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 ACBD7Q8N6N7 88 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 BPIFB6Q8NFQ5 453 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 TMEM167AQ8TBQ9 72 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 NRG4Q8WWG1 115 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 LGALS12Q96DT0 336 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 RAB40CQ96S21 281 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 NEU1Q99519 415 aa3.97□□□□□ -1.77
COL4A3-206ENST00000487633 CHMP1AQ9HD42 196 aaPredicted RBP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 FAM212BQ9NTI7 297 aaPredicted RBP3.97□□□□□ -1.77
COL4A3-206ENST00000487633 TRAV14DV4A0A0A6YYC5 116 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 EFCAB10A6NFE3 127 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 FOXI3A8MTJ6 420 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 F5H768 121 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 WBP4O75554 376 aaKnown RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 IGKV3-20P01619 116 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 PLA2G1BP04054 148 aaKnown RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 GNAO1P09471 354 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 HIST1H1BP16401 226 aaKnown RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 CRHBPP24387 322 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 DCKP27707 260 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 HSPA13P48723 471 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 GBX2P52951 348 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 CCL18P55774 89 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 TMEM50BP56557 158 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 DAD1P61803 113 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 RTL8BQ17RB0 113 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 GLT8D1Q68CQ7 371 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 TOMM20LQ6UXN7 152 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 TMPRSS11AQ6ZMR5 421 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 ZFP41Q8N8Y5 198 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 ZNF709Q8N972 641 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 OR52I1Q8NGK6 324 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 OSR1Q8TAX0 266 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 APH1BQ8WW43 257 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 BSCL2Q96G97 398 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 TMEM80Q96HE8 168 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 Q9H521 79 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 FNDC4Q9H6D8 234 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 ZFAND3Q9H8U3 227 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 PAK1IP1Q9NWT1 392 aaPredicted RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 C21orf62Q9NYP8 219 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 PTTG2Q9NZH5 202 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 EXOGQ9Y2C4 368 aaKnown RBP3.96□□□□□ -1.78
COL4A3-206ENST00000487633 LRRC42Q9Y546 428 aa3.96□□□□□ -1.78
COL4A3-206ENST00000487633 TRBV6-6A0A0A6YYG2 114 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 TRBV5-5A0A0J9YX44 114 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 A0A1B0GU03 582 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 LOC102723971A0A1B0GUV8 181 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 PLAC8L1A1L4L8 177 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 PTGES3LE9PB15 166 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 H3BMM0 161 aa3.95□□□□□ -1.78
COL4A3-206ENST00000487633 BET1O15155 118 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms