RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 GBF1Q92538 1859 aa11.24□□□□□ -0.61
HDLBP-241ENST00000487169 DANCRP0C864 163 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 EGR1P18146 543 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 KIR2DL2P43627 348 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-241ENST00000487169 CD81P60033 236 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 OR4A47Q6IF82 309 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 OR8A1Q8NGG7 326 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 LYZL4Q96KX0 146 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 FNDC1Q4ZHG4 1894 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-241ENST00000487169 PTPRDP23468 1912 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
HDLBP-241ENST00000487169 IGKV1D-33P01593 117 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 IGKV1-33P01594 117 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 WDR82Q6UXN9 313 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 TRGV3P03979 118 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 EIF4E3Q8N5X7 224 aaKnown RBP11.23□□□□□ -0.61
HDLBP-241ENST00000487169 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 CTAG1AP78358 180 aa11.23□□□□□ -0.61
HDLBP-241ENST00000487169 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-241ENST00000487169 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 TMEM177Q53S58 311 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 BMPERQ8N8U9 685 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 FAM131CQ96AQ9 280 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 RARRES2Q99969 163 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 LOC389332A0A1B0GUA5 103 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 MT-ND6P03923 174 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
HDLBP-241ENST00000487169 RAB9AP51151 201 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 TWIST1Q15672 202 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 DHRS11Q6UWP2 260 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-241ENST00000487169 RTBDNQ9BSG5 229 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-241ENST00000487169 MRPL20Q9BYC9 149 aaKnown RBP11.22□□□□□ -0.61
HDLBP-241ENST00000487169 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 CCL1P22362 96 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 TMEM97Q5BJF2 176 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 MYOZ3Q8TDC0 251 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
HDLBP-241ENST00000487169 HEATR5AQ86XA9 2040 aa11.22□□□□□ -0.61
HDLBP-241ENST00000487169 TRBV6-7A0A0A0MS04 114 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 PTBP3O95758 552 aaKnown RBP11.21□□□□□ -0.61
HDLBP-241ENST00000487169 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 PSMG3Q9BT73 122 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-241ENST00000487169 IGKV1D-13A0A0B4J2D9 117 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 TFF1P04155 84 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 IGKV1-13P0DP09 117 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 CRYGSP22914 178 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 GTF2H5Q6ZYL4 71 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 IFI27L2Q9H2X8 130 aa11.21□□□□□ -0.61
HDLBP-241ENST00000487169 TRGC2P03986 189 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 CKS2P33552 79 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 TIMP3P35625 211 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 Q0VFX4 171 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.62
HDLBP-241ENST00000487169 VPS25Q9BRG1 176 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 PARLQ9H300 379 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 SMIM6P0DI80 62 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 WDR25Q64LD2 544 aaPredicted RBP11.21□□□□□ -0.62
HDLBP-241ENST00000487169 ZNF841Q6ZN19 808 aa11.21□□□□□ -0.62
HDLBP-241ENST00000487169 PAQR4Q8N4S7 273 aaPredicted RBP11.21□□□□□ -0.62
HDLBP-241ENST00000487169 MYO9AB2RTY4 2548 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 CA7P43166 264 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 HERVK_113P61574 105 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 RELQ04864 619 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-241ENST00000487169 NBEAP1P0C6P0 100 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 GCHFRP30047 84 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 SRSF6Q13247 344 aaKnown RBP11.2□□□□□ -0.62
HDLBP-241ENST00000487169 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 PHLDA3Q9Y5J5 127 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 TRAV24A0A0B4J272 114 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 IGKV3-20P01619 116 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 RSPO3Q9BXY4 272 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-241ENST00000487169 C21orf62Q9NYP8 219 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 FBXL7Q9UJT9 491 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 PAM16Q9Y3D7 125 aa11.2□□□□□ -0.62
HDLBP-241ENST00000487169 J3QRE1 110 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 ZNF207O43670 478 aaKnown RBP11.19□□□□□ -0.62
HDLBP-241ENST00000487169 AGAP20933 346 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 DLX1P56177 255 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 RELBQ01201 579 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 CBLN4Q9NTU7 201 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 GPX1P07203 203 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 ICAM4Q14773 271 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 TNCP24821 2201 aa11.19□□□□□ -0.62
HDLBP-241ENST00000487169 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms