RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 CXCL3P19876 107 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 GNB1P62873 340 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 SMCO1Q147U7 214 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 C5orf64Q2M2E5 130 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 Q6ZRM9 215 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 SLC35E3Q7Z769 313 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 OR4A5Q8NH83 315 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 OR1S1Q8NH92 325 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-219ENST00000486935 A0A1B0GU03 582 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 HMX3A6NHT5 357 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 CA2P00918 260 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 MYOD1P15172 320 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 BCAP31P51572 246 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 SLC35B1P78383 322 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 PPP1R27Q86WC6 154 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 FAM71E2Q8N5Q1 922 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 GSKIPQ9P0R6 139 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 TNCP24821 2201 aa12.11□□□□□ -0.47
SEMA4D-219ENST00000486935 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 FCN1O00602 326 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 SCGB1D2O95969 90 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 IGHG2P01859 326 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 HLA-GP17693 338 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 H2BFSP57053 126 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 RPL23AP62750 156 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 TNXAQ16473 311 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 PRSS8Q16651 343 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 MRGPRG-AS1Q2M3A8 158 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
SEMA4D-219ENST00000486935 NUDT19A8MXV4 375 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 ST8SIA3O43173 380 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 ACTL6BO94805 426 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 SLC25A6P12236 298 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 C10orf55Q5SWW7 151 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 STPG2Q8N412 459 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 WDR89Q96FK6 387 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 ZNF436Q9C0F3 470 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 ZFP57Q9NU63 452 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 FOXA2Q9Y261 457 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 OR51B2Q9Y5P1 312 aa12.09□□□□□ -0.47
SEMA4D-219ENST00000486935 CNIH1O95406 144 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 IFNA17P01571 189 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 C8orf86Q6ZUL3 223 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 LINC00482Q8N8I6 264 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 ABHD5Q8WTS1 349 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 HINT2Q9BX68 163 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 COMMD5Q9GZQ3 224 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 COA4Q9NYJ1 87 aa12.08□□□□□ -0.48
SEMA4D-219ENST00000486935 AP4M1O00189 453 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 PITX3O75364 302 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 HLA-DRB1P01911 266 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 TRAPPC2P0DI81 140 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 TRAPPC2BP0DI82 140 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 MAS1LP35410 378 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 KRTAP10-11P60412 298 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 S100A10P60903 97 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 CXorf66Q5JRM2 361 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 GRPEL2Q8TAA5 225 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 FYTTD1Q96QD9 318 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 HSPB9Q9BQS6 159 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 NMES1Q9C002 83 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 MAGT1Q9H0U3 335 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 FKBP11Q9NYL4 201 aa12.07□□□□□ -0.48
SEMA4D-219ENST00000486935 IGHV7-81A0A0B4J1V7 117 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 TEX50A0A1B0GTY4 177 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 GIPP09681 153 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 HOXD3P31249 432 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 RPL27AP46776 148 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 SSBP2P81877 361 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 FXYD3Q14802 87 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 ZNF429Q86V71 674 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 OR1L8Q8NGR8 309 aa12.06□□□□□ -0.48
SEMA4D-219ENST00000486935 ARPC1AQ92747 370 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms