RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MAL2Q969L2 176 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 ADAT3Q96EY9 351 aaPredicted RBP1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 HIST1H2BNQ99877 126 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 HIST1H2BMQ99879 126 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR2D2Q9H210 308 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 WFDC1Q9HC57 220 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 MED11Q9P086 117 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 COPZ2Q9P299 210 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 ASB4Q9Y574 426 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 PHLDA3Q9Y5J5 127 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 DYSFO75923 2080 aa1.74□□□□□ -2.13
LAPTM4A-202ENST00000483117 KMT2EQ8IZD2 1858 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 MED23Q9ULK4 1368 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 ITGB4P16144 1822 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGKV2D-24A0A075B6R9 120 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGKV1-12A0A0C4DH73 117 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 TMEM189A5PLL7 270 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 MIF4GDA9UHW6 222 aaKnown RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 UBE2L6O14933 153 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 PLA2G10O15496 165 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 GGCTO75223 188 aaKnown RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 BANF1O75531 89 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 LHBP01229 141 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGKV1D-12P01611 117 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 CSN2P05814 226 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 SMIM17P0DL12 118 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 GZMHP20718 246 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 CASP1P29466 404 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 RPL27AP46776 148 aaKnown RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 RPS11P62280 158 aaKnown RBP eCLIP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 PSG9Q00887 426 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 BSPH1Q075Z2 132 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 WHAMMP3Q1A5X7 153 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 DEFB116Q30KQ4 102 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 MRPL51Q4U2R6 128 aaKnown RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 RPL13AP3Q6NVV1 102 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 SLC25A34Q6PIV7 304 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 UNQ9165/PRO28630Q6UXU0 137 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 Q6ZQT7 251 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF101Q8IZC7 436 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 TMEM86AQ8N2M4 240 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZFAND2AQ8N6M9 145 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF709Q8N972 641 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 APCDD1LQ8NCL9 501 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR51T1Q8NGJ9 327 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR10D4PQ8NGN7 298 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 KLK6Q92876 244 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 HIST1H2BAQ96A08 127 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 L3HYPDHQ96EM0 354 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGF2BP2-AS1Q96M15 143 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 FOPNLQ96NB1 174 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 CCDC115Q96NT0 180 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 IP6K3Q96PC2 410 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR2J1Q9GZK6 312 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 GABARAPL1Q9H0R8 117 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 C11orf68Q9H3H3 251 aaKnown RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 TUBA4BQ9H853 241 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 EFCAB1Q9HAE3 211 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZNF586Q9NXT0 402 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 SNX12Q9UMY4 172 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 MIA3Q5JRA6 1907 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 DICER1Q9UPY3 1922 aaKnown RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 NAV1Q8NEY1 1877 aa1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 TET2Q6N021 2002 aaPredicted RBP1.73□□□□□ -2.13
LAPTM4A-202ENST00000483117 NCAPD3P42695 1498 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CAMSAP2Q08AD1 1489 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRAV36DV7A0A075B6V5 113 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 A0A087WUU8 490 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 A0A087WX48 190 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRAPPC2LH3BP13 241 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 SH2D1AO60880 128 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 APOC1P02654 83 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 IGLV7-43P04211 117 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 PRM2P04554 102 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 BCL2P10415 239 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CD28P10747 220 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 S100A4P26447 101 aaKnown RBP1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 S100A7P31151 101 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CA5AP35218 305 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CD200P41217 278 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CCR2P41597 374 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CSN1S1P47710 185 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 GABRA2P47869 451 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 POLR2HP52434 150 aaKnown RBP1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 AQP4P55087 323 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 FXYD7P58549 80 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 CKS1BP61024 79 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 YPEL3P61236 119 aaPredicted RBP1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 PLCXD2Q0VAA5 305 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR8G1Q15617 311 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 MORN2Q502X0 79 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 SPANXN3Q5MJ09 141 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 C10orf91Q5T1B1 145 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 Q5W150 140 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 SSX8Q7RTT4 187 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 KTN1-AS1Q86SY8 53 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 TRAPPC6BQ86SZ2 158 aa1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 ZFP62Q8NB50 900 aaPredicted RBP1.72□□□□□ -2.13
LAPTM4A-202ENST00000483117 OR11G2Q8NGC1 345 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms