RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 HAAOP46952 286 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 Q8N2B8 174 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 ZNF439Q8NDP4 499 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 RNF133Q8WVZ7 376 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 MBD3L1Q8WWY6 194 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 NKIRAS1Q9NYS0 192 aa1.38□□□□□ -2.19
CCDC58-204ENST00000479414 IGHV3-7P01780 117 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 MSMBP08118 114 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 SUPT4H1P63272 117 aaKnown RBP1.37□□□□□ -2.19
CCDC58-204ENST00000479414 CDK5R1Q15078 307 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 OGFRL1Q5TC84 451 aaPredicted RBP1.37□□□□□ -2.19
CCDC58-204ENST00000479414 TMEM86AQ8N2M4 240 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 PTH2Q96A98 100 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 CNBD2Q96M20 576 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 CMTM6Q9NX76 183 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 RSL24D1Q9UHA3 163 aaKnown RBP1.37□□□□□ -2.19
CCDC58-204ENST00000479414 LHFPL6Q9Y693 200 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 GLI3P10071 1580 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 SMARCA4P51532 1647 aa1.37□□□□□ -2.19
CCDC58-204ENST00000479414 TGIF2-C20orf24A0A0A6YYL0 155 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 A0A0J9YY10 115 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 TRBV10-2A0A0K0K1G8 114 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 A0A1B0GX78 115 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 TRAPPC13A5PLN9 417 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 RPSAP08865 295 aaKnown RBP1.36□□□□□ -2.19
CCDC58-204ENST00000479414 KCNE1P15382 129 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 BATFQ16520 125 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 COQ5Q5HYK3 327 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 C10orf67Q8IYJ2 551 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 ADAT1Q9BUB4 502 aaKnown RBP1.36□□□□□ -2.19
CCDC58-204ENST00000479414 EFCAB1Q9HAE3 211 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 IL36BQ9NZH7 164 aa1.36□□□□□ -2.19
CCDC58-204ENST00000479414 TONSLQ96HA7 1378 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 IGKV1D-43A0A0B4J1Z2 117 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 ISG15P05161 165 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 FGF6P10767 208 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 MYL12AP19105 171 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 RPL18Q07020 188 aaKnown RBP1.35□□□□□ -2.19
CCDC58-204ENST00000479414 TMEM86BQ8N661 226 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 OR8B3Q8NGG8 313 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 ROPN1LQ96C74 230 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 PARD6GQ9BYG4 376 aaPredicted RBP1.35□□□□□ -2.19
CCDC58-204ENST00000479414 TP73-AS1Q9UF72 201 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 BAIAP2Q9UQB8 552 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 POLEQ07864 2286 aa1.35□□□□□ -2.19
CCDC58-204ENST00000479414 SETD5Q9C0A6 1442 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 TRBV20OR9-2A0A075B6H5 130 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 MEIKINA0A087WXM9 373 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 IGKV3D-7A0A0C4DH55 119 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 IGKV3OR2-268A0A0C4DH90 116 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 ACOX3O15254 700 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 MRPS14O60783 128 aaKnown RBP1.34□□□□□ -2.19
CCDC58-204ENST00000479414 CLPSP04118 112 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 KRT7P08729 469 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 UCHL3P15374 230 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 RAB5BP61020 215 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 PMAIP1Q13794 54 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 ELOBQ15370 118 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 SURF2Q15527 256 aaPredicted RBP1.34□□□□□ -2.19
CCDC58-204ENST00000479414 DHFR2Q86XF0 187 aa1.34□□□□□ -2.19
CCDC58-204ENST00000479414 DCCP43146 1447 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 SLC22A1O15245 554 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 PRM2P04554 102 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 UBBP0CG47 229 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 SYPL2Q5VXT5 272 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 GLT8D1Q68CQ7 371 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 STRCQ7RTU9 1775 aa1.33□□□□□ -2.2
CCDC58-204ENST00000479414 C9orf84Q5VXU9 1444 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 TMEM212A6NML5 194 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 KCNK1O00180 336 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 C1QAP02745 245 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 RPS4Y1P22090 263 aaKnown RBP1.32□□□□□ -2.2
CCDC58-204ENST00000479414 EIF2B2P49770 351 aaKnown RBP1.32□□□□□ -2.2
CCDC58-204ENST00000479414 AP2S1P53680 142 aaPredicted RBP1.32□□□□□ -2.2
CCDC58-204ENST00000479414 CTAG1AP78358 180 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 ZNF345Q14585 488 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 C8orf74Q6P047 294 aa1.32□□□□□ -2.2
CCDC58-204ENST00000479414 TECTAO75443 2155 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 EEF1E1-BLOC1S5C9J1V9 151 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 NOS1APO75052 506 aaPredicted RBP1.31□□□□□ -2.2
CCDC58-204ENST00000479414 SHBGP04278 402 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 CALB1P05937 261 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 CAV1Q03135 178 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 SLC35B4Q969S0 331 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 OPTNQ96CV9 577 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 WDR61Q9GZS3 305 aaKnown RBP1.31□□□□□ -2.2
CCDC58-204ENST00000479414 FAM96AQ9H5X1 160 aa1.31□□□□□ -2.2
CCDC58-204ENST00000479414 SOX21Q9Y651 276 aaPredicted RBP1.31□□□□□ -2.2
CCDC58-204ENST00000479414 IRGMA1A4Y4 181 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 FABP5P3A8MUU1 101 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 F8W036 122 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 IGKV1-5P01602 117 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 PMP2P02689 132 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 ZNF80P51504 273 aaPredicted RBP1.3□□□□□ -2.2
CCDC58-204ENST00000479414 FXYD2P54710 66 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 CCL20P78556 96 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 RUNX1Q01196 453 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 IFITM2Q01629 132 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 GRK1Q15835 563 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms