RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SCGB2A2Q13296 93 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 FXYD3Q14802 87 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 RBMS3Q6XE24 437 aaKnown RBP10.32□□□□□ -0.76
CHD3-210ENST00000479080 Q8N2B8 174 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 OR5B3Q8NH48 314 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 PDCD10Q9BUL8 212 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 RNF126Q9BV68 326 aa10.32□□□□□ -0.76
CHD3-210ENST00000479080 PIGBOS1A0A0B4J2F0 54 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 FAM90A26D6RGX4 464 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 MPC2O95563 127 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 APELAP0DMC3 54 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 IAPPP10997 89 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 SPCS3P61009 180 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 LRRC37A5PQ49AS3 106 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 Q6ZSV7 163 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 OR11H4Q8NGC9 324 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 OR1L8Q8NGR8 309 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 GRPEL2Q8TAA5 225 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 ARPC1AQ92747 370 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 LINC00527Q9UJ94 153 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 LSM5Q9Y4Y9 91 aaKnown RBP10.31□□□□□ -0.76
CHD3-210ENST00000479080 DMRT1Q9Y5R6 373 aa10.31□□□□□ -0.76
CHD3-210ENST00000479080 MSGN1A6NI15 193 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 INS-IGF2F8WCM5 200 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 G3V318 75 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 M0QZK8 103 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 SYNGR2O43760 224 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 CCNKO75909 580 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 LYL1P12980 280 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 MFAP2P55001 183 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 S100A10P60903 97 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 RAP2BP61225 183 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 BSXQ3C1V8 233 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 TCTE3Q8IZS6 198 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 NOL4LQ96MY1 436 aaPredicted RBP10.3□□□□□ -0.76
CHD3-210ENST00000479080 OR4C12Q96R67 309 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 COMMD5Q9GZQ3 224 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 PARP11Q9NR21 331 aa10.3□□□□□ -0.76
CHD3-210ENST00000479080 FBN3Q75N90 2809 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 KCNAB3O43448 404 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 TCF21O43680 179 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 SSSCA1O60232 199 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 SOX15O60248 233 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 RBMXL2O75526 392 aaKnown RBP10.29□□□□□ -0.76
CHD3-210ENST00000479080 DEDDO75618 318 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 IFNA17P01571 189 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 IGF1P05019 195 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 REG1AP05451 166 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 PSMB6P28072 239 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 CFHR3Q02985 330 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 C10orf99Q6UWK7 81 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 SLC35E3Q7Z769 313 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 AKAP14Q86UN6 197 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 OR2C3Q8N628 320 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 LFNGQ8NES3 379 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 OR2T35Q8NGX2 323 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 SGMS2Q8NHU3 365 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 DTD1Q8TEA8 209 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 HINT2Q9BX68 163 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 SERTAD4Q9NUC0 356 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 MBD2Q9UBB5 411 aa10.29□□□□□ -0.76
CHD3-210ENST00000479080 C15orf62A8K5M9 175 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 H3BP45 60 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 WRBO00258 174 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 TSPAN9O75954 239 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 CNIH1O95406 144 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 RNASE2P10153 161 aaKnown RBP10.28□□□□□ -0.76
CHD3-210ENST00000479080 CTRB1P17538 263 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 HOXA1P49639 335 aaPredicted RBP10.28□□□□□ -0.76
CHD3-210ENST00000479080 CYCSP99999 105 aaKnown RBP10.28□□□□□ -0.76
CHD3-210ENST00000479080 PVRIGQ6DKI7 326 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 CTRB2Q6GPI1 263 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 HAPLN4Q86UW8 402 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 ASB13Q8WXK3 278 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 P2RX4Q99571 388 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 NPFFR1Q9GZQ6 430 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 WSB1Q9Y6I7 421 aa10.28□□□□□ -0.76
CHD3-210ENST00000479080 IGSF23A1L1A6 192 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 TRIM77I1YAP6 450 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 ACTL6BO94805 426 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 CRYGCP07315 174 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 PPIFP30405 207 aaKnown RBP10.27□□□□□ -0.77
CHD3-210ENST00000479080 ECSCRQ19T08 205 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 WIPF2Q8TF74 440 aaPredicted RBP10.27□□□□□ -0.77
CHD3-210ENST00000479080 BSCL2Q96G97 398 aaPredicted RBP10.27□□□□□ -0.77
CHD3-210ENST00000479080 PRSS22Q9GZN4 317 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 PLEKHA3Q9HB20 300 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 ZNF580Q9UK33 172 aa10.27□□□□□ -0.77
CHD3-210ENST00000479080 A0A1W2PN81 502 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 RNF222A6NCQ9 220 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 FAM24AA6NFZ4 105 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 PRSS46E5RG02 174 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 FBXO24O75426 580 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms