RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 TRAV3A0A0B4J244 114 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 IGHV4-28A0A0C4DH34 117 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 C15orf61A6NNL5 157 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 C15orf62A8K5M9 175 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 F8W735 103 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-213ENST00000476777 CHEK1O14757 476 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 MRPS14O60783 128 aaKnown RBP8.24□□□□□ -1.09
BRCA1-213ENST00000476777 GNAO1P09471 354 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 GADD45AP24522 165 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 SPHARQ15513 63 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 C10orf67Q8IYJ2 551 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 BPIFB6Q8NFQ5 453 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 ZNF414Q96IQ9 312 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 GPHA2Q96T91 129 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 ATP6V0BQ99437 205 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 SRSF8Q9BRL6 282 aaKnown RBP8.24□□□□□ -1.09
BRCA1-213ENST00000476777 RHPN1-AS1Q9BWJ2 59 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 HRASLSQ9HDD0 168 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 TAS2R8Q9NYW2 309 aa8.24□□□□□ -1.09
BRCA1-213ENST00000476777 ELF5Q9UKW6 265 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-213ENST00000476777 IGHV3-21A0A0B4J1V1 117 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 IGHV7-4-1A0A0J9YVY3 117 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 GIG44P09565 113 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-213ENST00000476777 CTXN2P0C2S0 81 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 DTYMKP23919 212 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 TALDO1P37837 337 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 LGALS9BQ3B8N2 356 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 HES5Q5TA89 166 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 FAM90A2PQ658T7 463 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 ZNF66Q6ZN08 573 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 GBGT1Q8N5D6 347 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 DHRSXQ8N5I4 330 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 GDPD1Q8N9F7 314 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 SCARB1Q8WTV0 552 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 C21orf62Q9NYP8 219 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 V9GY05 133 aa8.23□□□□□ -1.09
BRCA1-213ENST00000476777 IGKV3-7A0A075B6H7 116 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 ELOA3CA0A087WX78 387 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-213ENST00000476777 ERICH4A6NGS2 130 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 UPK2O00526 184 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 ARL6IP5O75915 188 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 AMBPP02760 352 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 P0DMU3 169 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 FAM231AP0DMU4 169 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 FAM231CP0DMU5 169 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 RANBP1P43487 201 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 RPS25P62851 125 aaKnown RBP8.22□□□□□ -1.09
BRCA1-213ENST00000476777 WT1-ASQ06250 92 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 TMEM116Q8NCL8 245 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 UFD1Q92890 307 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 QTRT1Q9BXR0 403 aaKnown RBP8.22□□□□□ -1.09
BRCA1-213ENST00000476777 COMMD5Q9GZQ3 224 aa8.22□□□□□ -1.09
BRCA1-213ENST00000476777 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.09
BRCA1-213ENST00000476777 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 K7EIM0 57 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 CYB5BO43169 146 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 SERPINE2P07093 398 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 CTSGP08311 255 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 OR13C7P0DN81 318 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 MIFP14174 115 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 RAB6AP20340 208 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 CALRP27797 417 aaKnown RBP8.21□□□□□ -1.1
BRCA1-213ENST00000476777 POU2AF1Q16633 256 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 LEMD1Q68G75 181 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 SLC25A24Q6NUK1 477 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 C8orf59Q8N0T1 100 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-213ENST00000476777 OR10C1Q96KK4 312 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 AIFM2Q9BRQ8 373 aa8.21□□□□□ -1.1
BRCA1-213ENST00000476777 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 DEFB131BA0A096LNP1 70 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 ZNF705EA8MWA4 302 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-213ENST00000476777 RBFOX2O43251 390 aaKnown RBP eCLIP8.2□□□□□ -1.1
BRCA1-213ENST00000476777 TNFSF12O43508 249 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 FGF2P09038 288 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 TAS2R31P59538 309 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 DEFB131AP59861 70 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 C12orf74Q32Q52 190 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 CNIH2Q6PI25 160 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 ZNF773Q6PK81 442 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 Q6ZR54 194 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 SPAG16Q8N0X2 631 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 UBAC2Q8NBM4 344 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 CMTM3Q96MX0 182 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 SCRT1Q9BWW7 348 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 DCSTAMPQ9H295 470 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 F11RQ9Y624 299 aaKnown RBP8.2□□□□□ -1.1
BRCA1-213ENST00000476777 X6R8D5 127 aa8.2□□□□□ -1.1
BRCA1-213ENST00000476777 TRAV14DV4A0A0A6YYC5 116 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 METTL21EPA6NDL7 271 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 PTGES3LE9PB15 166 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 NUPL2O15504 423 aaKnown RBP8.19□□□□□ -1.1
BRCA1-213ENST00000476777 DFFBO76075 338 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 TRAPPC2P0DI81 140 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 TRAPPC2BP0DI82 140 aa8.19□□□□□ -1.1
BRCA1-213ENST00000476777 NQO2P16083 231 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms