RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 OR1L8Q8NGR8 309 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 OR5B3Q8NH48 314 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 OR1S1Q8NH92 325 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 SRSF12Q8WXF0 261 aaKnown RBP7.88□□□□□ -1.15
COL8A1-206ENST00000474648 ARPC1AQ92747 370 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 FYTTD1Q96QD9 318 aaKnown RBP7.88□□□□□ -1.15
COL8A1-206ENST00000474648 SPIN2AQ99865 258 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 SPIN2BQ9BPZ2 258 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 FAM103A1Q9BTL3 118 aaKnown RBP7.88□□□□□ -1.15
COL8A1-206ENST00000474648 COMMD5Q9GZQ3 224 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 C16orf95Q9H693 158 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 GSKIPQ9P0R6 139 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 HSPB7Q9UBY9 170 aa7.88□□□□□ -1.15
COL8A1-206ENST00000474648 PLXNB1O43157 2135 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 hCG_2014768A0A024R1R8 64 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 FAM90A26D6RGX4 464 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 ATP6V0E1O15342 81 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 RBMXL2O75526 392 aaKnown RBP7.87□□□□□ -1.15
COL8A1-206ENST00000474648 ACTL6BO94805 426 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 NXPH3O95157 252 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 NDUFA7O95182 113 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 MBPP02686 304 aaPredicted RBP7.87□□□□□ -1.15
COL8A1-206ENST00000474648 TRAPPC2P0DI81 140 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 TRAPPC2BP0DI82 140 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 VDAC2P45880 294 aaPredicted RBP7.87□□□□□ -1.15
COL8A1-206ENST00000474648 CRIP2P52943 208 aaPredicted RBP7.87□□□□□ -1.15
COL8A1-206ENST00000474648 PRCDQ00LT1 54 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 TMEM95Q3KNT9 176 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 SPINK9Q5DT21 86 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 C11orf87Q6NUJ2 197 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 OR10W1Q8NGF6 305 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 SGMS2Q8NHU3 365 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 GRPEL2Q8TAA5 225 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 NOL4LQ96MY1 436 aaPredicted RBP7.87□□□□□ -1.15
COL8A1-206ENST00000474648 RBKSQ9H477 322 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 PARP11Q9NR21 331 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 SERTAD4Q9NUC0 356 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 LINC00527Q9UJ94 153 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 WSB1Q9Y6I7 421 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 ATRQ13535 2644 aa7.87□□□□□ -1.15
COL8A1-206ENST00000474648 IGLC7A0M8Q6 106 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 INS-IGF2F8WCM5 200 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 G3V318 75 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 KCNAB3O43448 404 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 IFNA17P01571 189 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 CRYBA1P05813 215 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 AREGP15514 252 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 NKX2-1P43699 371 aaPredicted RBP7.86□□□□□ -1.15
COL8A1-206ENST00000474648 BCAP31P51572 246 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 POLR2GP62487 172 aaKnown RBP eCLIP7.86□□□□□ -1.15
COL8A1-206ENST00000474648 CYCSP99999 105 aaKnown RBP7.86□□□□□ -1.15
COL8A1-206ENST00000474648 WT1-ASQ06250 92 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 AKIRIN2Q53H80 203 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 LFNGQ8NES3 379 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 SRSF8Q9BRL6 282 aaKnown RBP7.86□□□□□ -1.15
COL8A1-206ENST00000474648 HINT2Q9BX68 163 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 NMES1Q9C002 83 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 ZNF436Q9C0F3 470 aaPredicted RBP7.86□□□□□ -1.15
COL8A1-206ENST00000474648 WNT10AQ9GZT5 417 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 MAGT1Q9H0U3 335 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 C11orf1Q9H5F2 150 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 ZNF580Q9UK33 172 aa7.86□□□□□ -1.15
COL8A1-206ENST00000474648 TRAV41A0A0B4J266 112 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 H0YIZ8 118 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 K7EPK0 472 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 AP4M1O00189 453 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 SYNGR2O43760 224 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 SOX15O60248 233 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 TMEM50AO95807 157 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 CRYGCP07315 174 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 APELAP0DMC3 54 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 OR13C7P0DN81 318 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 HKR1P10072 659 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 PPIFP30405 207 aaKnown RBP7.85□□□□□ -1.15
COL8A1-206ENST00000474648 PAX9P55771 341 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 CFHR3Q02985 330 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 RAB32Q13637 225 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 Q5BKY6 102 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 C19orf35Q6ZS72 473 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 STPG2Q8N412 459 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 TTC9CQ8N5M4 171 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 OR2C3Q8N628 320 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 ABHD5Q8WTS1 349 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 TMEM68Q96MH6 324 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 PDCD10Q9BUL8 212 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 RNF126Q9BV68 326 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 CACFD1Q9UGQ2 172 aa7.85□□□□□ -1.15
COL8A1-206ENST00000474648 RCL1Q9Y2P8 373 aaKnown RBP7.85□□□□□ -1.15
COL8A1-206ENST00000474648 A0A1W2PN81 502 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 NPIPB5A8MRT5 1133 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 CEBPZOSA8MTT3 80 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 MED6O75586 246 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 SCGB1D2O95969 90 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 GIPP09681 153 aaPredicted RBP7.84□□□□□ -1.15
COL8A1-206ENST00000474648 CTRB1P17538 263 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 PSMB6P28072 239 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 CHRNA7P36544 502 aa7.84□□□□□ -1.15
COL8A1-206ENST00000474648 TMEM267Q0VDI3 215 aaPredicted RBP7.84□□□□□ -1.15
COL8A1-206ENST00000474648 ECSCRQ19T08 205 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms