RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 HSBP1L1C9JCN9 74 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 NEURL1O76050 574 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 NXPH3O95157 252 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 OR2H2O95918 312 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 ARL14EPLP0DKL9 152 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 TNFSF4P23510 183 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 COL8A1P27658 744 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 CYB561P49447 251 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 GFRA1P56159 465 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 KRTDAPP60985 99 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 RPL31P62899 125 aaKnown RBP6.7□□□□□ -1.34
CCDC93-208ENST00000474546 PMP22Q01453 160 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 EIF4EBP1Q13541 118 aaPredicted RBP6.7□□□□□ -1.34
CCDC93-208ENST00000474546 SMIM21Q3B7S5 101 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 DMRTC1Q5HYR2 192 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 LYSMD4Q5XG99 296 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 TMEM256Q8N2U0 113 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 CPEB3Q8NE35 698 aaKnown RBP6.7□□□□□ -1.34
CCDC93-208ENST00000474546 OR4S2Q8NH73 311 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 RELTQ969Z4 430 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 EAF1Q96JC9 268 aaPredicted RBP6.7□□□□□ -1.34
CCDC93-208ENST00000474546 MDFIQ99750 246 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 OR2D2Q9H210 308 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 NRN1Q9NPD7 142 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 HEYLQ9NQ87 328 aaPredicted RBP6.7□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 OR1A1Q9P1Q5 309 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 JPT1Q9UK76 154 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 COX11Q9Y6N1 276 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 NOTCH1P46531 2555 aa6.7□□□□□ -1.34
CCDC93-208ENST00000474546 RP1L1Q8IWN7 2480 aaPredicted RBP6.7□□□□□ -1.34
CCDC93-208ENST00000474546 PKD1L1Q8TDX9 2849 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 CCDC168Q8NDH2 2452 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 CSPG4Q6UVK1 2322 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 IZUMO1RA6ND01 250 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 C15orf62A8K5M9 175 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 K7ERU9 68 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 KLK10O43240 276 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 SYNGR1O43759 233 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 HLA-DRB1P01911 266 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 APCSP02743 223 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 PPBPP02775 128 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 ATXN8OSP0DMR3 200 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 GDF1P27539 372 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 ARF6P62330 175 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 TFF3Q07654 80 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 KLF5Q13887 457 aaPredicted RBP6.69□□□□□ -1.34
CCDC93-208ENST00000474546 PRSS8Q16651 343 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF718Q3SXZ3 478 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 PRAMEF5Q5TYX0 476 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 PRAMEF6Q5VXH4 476 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 MRPL54Q6P161 138 aaKnown RBP6.69□□□□□ -1.34
CCDC93-208ENST00000474546 DTX1Q86Y01 620 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 SLC25A45Q8N413 288 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 C17orf78Q8N4C9 275 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 STXBP6Q8NFX7 210 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 OR5T1Q8NG75 326 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 OCC1Q8TAD7 63 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF837Q96EG3 531 aaPredicted RBP6.69□□□□□ -1.34
CCDC93-208ENST00000474546 GGTLC1Q9BX51 225 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 PRRG4Q9BZD6 226 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 PROK2Q9HC23 129 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 HES4Q9HCC6 221 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 FSCN3Q9NQT6 498 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 FOXJ2Q9P0K8 574 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 CLN8Q9UBY8 286 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 SSUH2Q9Y2M2 353 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF257Q9Y2Q1 563 aa6.69□□□□□ -1.34
CCDC93-208ENST00000474546 IGHV2-26A0A0B4J1V2 119 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 IQCF6A8MYZ5 107 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 HSPB6O14558 160 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 ZG16O60844 167 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 HSBP1O75506 76 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 TRAPPC6AO75865 159 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 NPSP0C0P6 89 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 JMJD7P0C870 316 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF883P0CG24 379 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 HIST1H1EP10412 219 aaKnown RBP6.68□□□□□ -1.34
CCDC93-208ENST00000474546 CCNOP22674 350 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 NPPCP23582 126 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 G6PCP35575 357 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 CA7P43166 264 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 IER3P46695 156 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 GPR12P47775 334 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 ATP5G3P48201 142 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 CLDN18P56856 261 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 PDCD1Q15116 288 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 LRRC10Q5BKY1 277 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 CT83Q5H943 113 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 DHRS13Q6UX07 377 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 TREML4Q6UXN2 200 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 C20orf204Q6ZNR8 217 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 OR4C5Q8NGB2 326 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 OR1K1Q8NGR3 316 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 CHCHD1Q96BP2 118 aaKnown RBP6.68□□□□□ -1.34
CCDC93-208ENST00000474546 TRIB1Q96RU8 372 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 MS4A6AQ9H2W1 248 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 PLEKHA3Q9HB20 300 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 PRNDQ9UKY0 176 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms