RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 GABARAPH6UMI1 98 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 LGALS9O00182 355 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 CYB5BO43169 146 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 CLEC3BP05452 202 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 SERPINE2P07093 398 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 OR13C7P0DN81 318 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 ARL3P36405 182 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 RPL5P46777 297 aaKnown RBP8.5□□□□□ -1.05
CKS1B-206ENST00000474215 WT1-ASQ06250 92 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 LCN12Q6JVE5 192 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 LHFPL1Q86WI0 220 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 GPHB5Q86YW7 130 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 LAX1Q8IWV1 398 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 TMEM229BQ8NBD8 167 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 TERB2Q8NHR7 220 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 DYNC2LI1Q8TCX1 351 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 TSC22D3Q99576 134 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 NDUFA4L2Q9NRX3 87 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 THYN1Q9P016 225 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 PRNDQ9UKY0 176 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 NSG2Q9Y328 171 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 U3KQK5 164 aa8.5□□□□□ -1.05
CKS1B-206ENST00000474215 MFSD2BA6NFX1 497 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 RAB3DO95716 219 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 CD74P04233 296 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 FRMD6-AS1P0C7T7 363 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 PGAM2P15259 253 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 PI3P19957 117 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 PTBP1P26599 531 aaKnown RBP eCLIP8.49□□□□□ -1.05
CKS1B-206ENST00000474215 TAS2R19P59542 299 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 RND3P61587 244 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 MRPS10P82664 201 aaKnown RBP8.49□□□□□ -1.05
CKS1B-206ENST00000474215 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 ADAMTSL5Q6ZMM2 481 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 Q8N402 240 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 OR4D10Q8NGI6 311 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 OR5B3Q8NH48 314 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 ZNF502Q8TBZ5 544 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 LSM10Q969L4 123 aaKnown RBP8.49□□□□□ -1.05
CKS1B-206ENST00000474215 ZNF486Q96H40 463 aaPredicted RBP8.49□□□□□ -1.05
CKS1B-206ENST00000474215 SEC22AQ96IW7 307 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 WWC2-AS2Q96NR7 200 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 TMEM14BQ9NUH8 114 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 CCDC59Q9P031 241 aaKnown RBP8.49□□□□□ -1.05
CKS1B-206ENST00000474215 SORL1Q92673 2214 aa8.49□□□□□ -1.05
CKS1B-206ENST00000474215 TENM3Q9P273 2699 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 IZUMO1RA6ND01 250 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 DBX1A6NMT0 343 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 IGKV1-39P01597 117 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 IGKV1D-39P04432 117 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 FOLR2P14207 255 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 SSBP1Q04837 148 aaKnown RBP8.48□□□□□ -1.05
CKS1B-206ENST00000474215 DEFB114Q30KQ6 69 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 SLC25A24Q6NUK1 477 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 STEAP1BQ6NZ63 245 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 H2BFWTQ7Z2G1 175 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 OR2K2Q8NGT1 345 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 OR4A16Q8NH70 328 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 ZFAND1Q8TCF1 268 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 VN1R17PQ8TDU5 208 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 DIRAS2Q96HU8 199 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 RABL2AQ9UBK7 228 aaPredicted RBP8.48□□□□□ -1.05
CKS1B-206ENST00000474215 RABL2BQ9UNT1 228 aa8.48□□□□□ -1.05
CKS1B-206ENST00000474215 C2orf70A6NJV1 201 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 A8MZ25 164 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 CTDSPLO15194 276 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 NOL3O60936 208 aaKnown RBP8.47□□□□□ -1.05
CKS1B-206ENST00000474215 IGHV4-30-4P0DP06 118 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 CBLN1P23435 193 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 MFAP2P55001 183 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 PIGPP57054 158 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 CD300EQ496F6 205 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-206ENST00000474215 SCGB2B2Q4G0G5 96 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 GTSCR1Q86UQ5 136 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 SGPP2Q8IWX5 399 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 DYNLRB2Q8TF09 96 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 SMIM4Q8WVI0 70 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 MRGPRFQ96AM1 343 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 THAP7Q9BT49 309 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-206ENST00000474215 C19orf73Q9NVV2 129 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 TECRQ9NZ01 308 aaKnown RBP8.47□□□□□ -1.05
CKS1B-206ENST00000474215 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
CKS1B-206ENST00000474215 F11RQ9Y624 299 aaKnown RBP8.47□□□□□ -1.05
CKS1B-206ENST00000474215 DNAH9Q9NYC9 4486 aa8.46□□□□□ -1.05
CKS1B-206ENST00000474215 C3orf85A0A1B0GTC6 90 aa8.46□□□□□ -1.06
CKS1B-206ENST00000474215 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
CKS1B-206ENST00000474215 H3BMQ9 156 aa8.46□□□□□ -1.06
CKS1B-206ENST00000474215 ATG12O94817 140 aa8.46□□□□□ -1.06
CKS1B-206ENST00000474215 GPR183P32249 361 aa8.46□□□□□ -1.06
CKS1B-206ENST00000474215 PPP5CP53041 499 aa8.46□□□□□ -1.06
CKS1B-206ENST00000474215 HSPE1P61604 102 aaKnown RBP8.46□□□□□ -1.06
CKS1B-206ENST00000474215 IL18Q14116 193 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms